Gene Snas_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2386 
Symbol 
ID8883581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2530025 
End bp2530591 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511163 
Protein GI291299885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.125037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00068546 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTCAA GCTGGGTGTG GCGGCGTGGC CGCAAGTTGA AGCGCGCCGA CCATGTCCAC 
GGCTGGTGGT GGGAGGCCGT TCTGGGCGAC GATGAGCACG GCCAGTGGGC GGCACAGCTG
GCCCAGGCAC CGACTTTTCT CAGGGACGGC ACCGTGTTTC GCATGGCCGA TGCGGTGATC
CGCTGCTATC CCCGCGACGA GTGGTGGGTG GCGACGTTCT ACGGCTCGGA GCGTGGCGTG
ACCTTCGTCC GGCCCGGTGG TGGCGTGGAC GAACGGCTCA ATCCGAATGC GATCTATGTG
GACATGTCGA CACCGCCTGA ATGGACGGAA GCGGGGATCT CGTTCGTGGA CCTCACCGTG
GACGTGGTCA AACGGTACGA CGGGACGATC GCCGTCCTGG ACGAGGACGA GGTTGACGAA
GAGGCGCGTA AGTGGGCGAC GCCCGCCGGT CAACTGGCGC AGGCGCGGCA CAGCCGGGCT
CGGGTCGAGG GCTTTATGAC AGCGGGAGTT GGTGTTTTCG GCGTGGTCGC GGAGTCGTGG
CGGGACCGGT TCGAGGGTTG TCGGTGA
 
Protein sequence
MSSSWVWRRG RKLKRADHVH GWWWEAVLGD DEHGQWAAQL AQAPTFLRDG TVFRMADAVI 
RCYPRDEWWV ATFYGSERGV TFVRPGGGVD ERLNPNAIYV DMSTPPEWTE AGISFVDLTV
DVVKRYDGTI AVLDEDEVDE EARKWATPAG QLAQARHSRA RVEGFMTAGV GVFGVVAESW
RDRFEGCR