| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2378 |
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| Symbol | |
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| ID | 8883573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 2520042 |
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| End bp | 2522114 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
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| Protein accession | YP_003511156 |
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| Protein GI | 291299878 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.887073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00102356 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCGA TGAAAGAGTT CCCCGACGAG GTAGTCACCA AGTCGCTGGT GCGTTACGTC
CGGGTGCCCG GTATGGACGG TGAGGCCGCC CTCATCACCC TGGACAACGG GCACGACCAC
AAGAAGCCCA ACTCGCTGGG CCCGGCCGGA CTGGCCTCAC TGGACGCGGC CCTCGACGAG
GTCTTCGCGC GCACGCCGAA GGTGCGGTTC GTCGCCGTCA CCGGCAAACC GTTTATCTTC
TGCGTCGGCG CCGACATCAC CGGCATGCCG CTGATCGAGA CCAAGGACGA CGCGCGCACC
ATGGCCCGCG CCGGACACGA CGTGTTCGCG CGGCTGAAGA ACTCCGAGAT CCCGACCTTC
GCGTTCGTCA ACGGCGCGGC CATGGGCGGC GGCGTCGAGC TGTCGCTGCA CTGCCACTAC
CGGACCATCT CGGGCTCGGC GGCGGCGTTC GCGCTGCCGG AGTGCTTCAT CGGCCTGGCA
CCGACCTGGG GCGGCACCCA GTTGCTGCCC AACCTGATCG GCGCCGACGG CGCGGTCAAG
GTGATCATCG AGAACGCGCT CAACCAGAAC AAGATGCTGC GGCCCAAGGA GGTCCACGGG
CTGGGCATCG CCGACACGCT GCTGGAGGCC GCCGACTTCC TGGAGGAGTC GCTGGCCTGG
GCCGCCAAGG TCACCGACGG CCAGATCACC GTCGAGCGCC CCGAGATCGA CCGGGGCGAG
GCCTGGGACG CCGCGCTGGC GCGCGGCAAG GCGGTGGCCG ACATGAAGCT GCACGGCGCG
GCTCCCGCGC CCTACATGGC GCTGGACCTG ATGGCACAGG CCAAAACCGT CAGCTTCGAG
GAGGGCACCG CCGCCGAGGA CGAGGTGCTG GCCGCGCTGT TGGTCTCGCC CGAGCTGAAG
TCCAGTCTGT ACGCCTTCGA CCTGGTGCAG AAGCGCGCCA AGCGTCCGGT GGGCGTGCCC
GACAAGTCGC TGGCCCGTCC GGTCGGCAAG GTCGGTGTCG TGGGTGCCGG GCTGATGGCC
TCGCAGCTGG CGCTGCTGTT CGTGCGGCGC CTGGAGGTCC CGGTCGTCAT GACCGACCTG
GACGAGGAGC GGGTCGCCAA GGGCGTGGGT TACGTACACG CCGAAGTGGA CAAGCTGCTG
GGCAAGGGCC GCATCAACTC CGACAAGGCC GCCAAGCTCA AGGCGCTGGT GTCGGGTTCG
GTCGACAAGT CGGTGTTCGC CGACGCCGAC TTCGTCATCG AGGCCGTGTT CGAGGAACTG
GGCCTGAAGA AGCGGATCTT CGCCGAGCTG GAGGACCTGG TCTCGGACGA GTGCGTCCTG
GCCACCAACA CCTCCTCGCT GTCGGTGTCC GACATGGCCG CCGACCTGCG GCACCCCGAA
CGGGTGGTGG GCTTCCACTT CTTCAACCCG GTGGCGATCC TGCCGCTGCT GGAAGTGGTG
CGCGCCAAGC AGACCGACGA CGCCACCGTC GCCACCGCGT TCAAGGTGTG CAAGGAACTG
AAGAAGAACG GCGTGCTGGT GGCCGACGCG CCCGCGTTCG TCGTCAACCG GCTGCTGACC
CGGTTCCTGG GCGAGATCTT CGCCGCCGTC GACGAGGGCA CCGACATCGA GGTCGCCGAC
CACGCCGTGG ACGAACTGGG ACTGCCGATG TCGCCGTTCG TGCTGCTGCA ACTGGTCGGC
CCGGCGGTGG CCCGGCACGT GGCGCAGACG CTCCACGACG CCTTCCCCGA CCGCTACGGC
GTTTCGTCCA ACCTCGACAA ACTCGTCGAG GCGGGCAAGA CGAGCGTCTA CACCTGGGAC
GCCACCGGCA AACCGTCCGT CGACCCGGAC ATCCCGTCTA TCATGGAGTT CGGCGACAAG
CCGTCCACCG CCGAGCAGAT CCGCGACCGC GCGCTGGGCG CGCTGGCCGA CGAGGTCCGC
CGGATGCTGG ACGAGGGCGT CGTCGCCGCG GCCGAGGACA TCGACCTGTG CATGATCCTG
GGCGCGGGCT GGCCGTTCCA CCTGGGCGGG ATCACCCCGT ACCTCGACCG CGCCGGCGTC
ACGGCGAAGG TCACCGGAAA GACCTTCCAC TAG
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| Protein sequence | MKAMKEFPDE VVTKSLVRYV RVPGMDGEAA LITLDNGHDH KKPNSLGPAG LASLDAALDE
VFARTPKVRF VAVTGKPFIF CVGADITGMP LIETKDDART MARAGHDVFA RLKNSEIPTF
AFVNGAAMGG GVELSLHCHY RTISGSAAAF ALPECFIGLA PTWGGTQLLP NLIGADGAVK
VIIENALNQN KMLRPKEVHG LGIADTLLEA ADFLEESLAW AAKVTDGQIT VERPEIDRGE
AWDAALARGK AVADMKLHGA APAPYMALDL MAQAKTVSFE EGTAAEDEVL AALLVSPELK
SSLYAFDLVQ KRAKRPVGVP DKSLARPVGK VGVVGAGLMA SQLALLFVRR LEVPVVMTDL
DEERVAKGVG YVHAEVDKLL GKGRINSDKA AKLKALVSGS VDKSVFADAD FVIEAVFEEL
GLKKRIFAEL EDLVSDECVL ATNTSSLSVS DMAADLRHPE RVVGFHFFNP VAILPLLEVV
RAKQTDDATV ATAFKVCKEL KKNGVLVADA PAFVVNRLLT RFLGEIFAAV DEGTDIEVAD
HAVDELGLPM SPFVLLQLVG PAVARHVAQT LHDAFPDRYG VSSNLDKLVE AGKTSVYTWD
ATGKPSVDPD IPSIMEFGDK PSTAEQIRDR ALGALADEVR RMLDEGVVAA AEDIDLCMIL
GAGWPFHLGG ITPYLDRAGV TAKVTGKTFH
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