Gene Snas_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2374 
Symbol 
ID8883569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2516912 
End bp2518177 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content73% 
IMG OID 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_003511152 
Protein GI291299874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0273182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00857562 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGAAT CCGTGGGCCG GGCCGTCCAG TCCCAGATCT ACCGGGACGG CGTCTACGGC 
CGCAAACCCG CCGTCCCCGT CGCGGCCGCG GCACTGCGAG ACGCGGCACA CCGCCGACTG
TCCAAACGGG CGCTCGGCTA CGTCGCCGGT TCGGCAGGGC TCGAGACCAC CGCGACGGCC
AACCGCGCCG CCTTCGACGC CTGGCGCGTC GTCCCGCACA TCCTCACCGA CGTGTCCGAA
CGCGACCTCG GCGTCGACCT GTTCGGCCGC CGCCGCCCCA CCCCCTACCT GCTGGCCCCC
ATCGGCGTGC TCGACCTGGT CCACCCCGAG GCCGACCTCG CCGTCGCCCG CGCCGCCACC
GACGCGGGCG TGCCCATGAT CGTCTCCAGC CAGGCCTCCA CCCCGATGGA GGACATCGCG
GCGGCCATCG GCGGCGGCAG CTGGTGGTTC CAGTTGTACT GGAGCCGCGA GGACGCCCTG
ATGGAGAGCT TCGTGTCCCG CGCCGAGAAA GCCGGGGCCG AGGCCATCGT CGTCACCCTC
GACACCCACC TGCTGGGCTG GCGCCCCCGC GACCTCGACG ACGCCTACCT CCCGTTCGCG
TTCGGCCGGG GCATCGCCCA GTACACCTCC GACCCGGTCT TCACCGCGCT CGTCCGCGAA
CGCGCCACCC GCCCCCGCAC CACCCAGCGC CCCACCCTCG CGGCCCTGTC GGCCCTGGCC
TCCATCGCCC GCCACCACCC CGGCGGCTTC TGGACCAACC TGCGCTCCCC CCTCCCCCGA
GCGGCCGTGG AAACCTTCCT CGACGTGTTC TCCCGCCCCA CCCTCACCTG GGACGACCTG
GAGAAGCTGC GCCAGCACAC CACCCTCCCG ATCCTCCTCA AAGGCGTCCT GCACCCCGAC
GACGCGGTCC GCGCGGTCGA CAGCGGCGTC GACGGCATCG TCGTGTCCAA CCATGGCGGC
CGCCAGATCG ACGGCGCCAT AGCGTCCCTG GAGGCACTGC CGCGCGTCGT AACCGCCGTC
GAGGACGCCA TCCCGGTCCT GTTCGACAGC GGCATCCGGG GCGGCGCCGA CGCCTACAAA
GCCCTCGCCC TGGGAGCCCA CGCCGTCTGC CTGGGCCGCC CCTACGTCTA CGGCCTCACC
CTCGCGGGCA CCATCGGCGT CCGCCAGGTC CTGTCCCACT TCATCGCCGA GCTCGACCTC
ACCCTGGGCC TGTCGGGCTG CACCTCCATT CCCGACATCA CCCGCGACAC CCTGCGCGCG
GTGTGA
 
Protein sequence
MRESVGRAVQ SQIYRDGVYG RKPAVPVAAA ALRDAAHRRL SKRALGYVAG SAGLETTATA 
NRAAFDAWRV VPHILTDVSE RDLGVDLFGR RRPTPYLLAP IGVLDLVHPE ADLAVARAAT
DAGVPMIVSS QASTPMEDIA AAIGGGSWWF QLYWSREDAL MESFVSRAEK AGAEAIVVTL
DTHLLGWRPR DLDDAYLPFA FGRGIAQYTS DPVFTALVRE RATRPRTTQR PTLAALSALA
SIARHHPGGF WTNLRSPLPR AAVETFLDVF SRPTLTWDDL EKLRQHTTLP ILLKGVLHPD
DAVRAVDSGV DGIVVSNHGG RQIDGAIASL EALPRVVTAV EDAIPVLFDS GIRGGADAYK
ALALGAHAVC LGRPYVYGLT LAGTIGVRQV LSHFIAELDL TLGLSGCTSI PDITRDTLRA
V