Gene Snas_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2362 
Symbol 
ID8883557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2501941 
End bp2502723 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003511140 
Protein GI291299862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.628756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC AACTGAGCCG CAAGATCGCA CTGGTCACCG GCGCCAGCCG GGGCATCGGA 
CTGGCCACCG TCCGCGCCCT GGAGGCCGAA GGCGTGCGCG TGGTCGCCGC CTCCCGCTCC
ATCTCCGACG GACTGCGCTC CACCGGCGCC ATCACCATCC CGGCCGACCT GTCGCACCCC
GACGCCCCGG CCGAGCTGGT CGCCGCGACC ATCGAGAAAC TGGGCGGCCT CGACATCCTC
GTCAACAACG TCGGCGGCGG CGACGGCGCG CAGCTGGGCG GCCTGCTCGA CTTCGACGAC
GCCACCTGGC GCGACACCTT CGAACTCAAC TTCTTCGCCG CGATGCGCAC CGCGCGCGCC
GCGATGCCCG GCCTGCTGGC CAGCGGCGGC GTCATCGTCA ACATCTCCTC GATCGGCGCC
AAGGTCCCCG GCGGCAACCC GCTGCCCTAC GCCAGCGCCA AGGCCGCGCT GGACGCGTTC
GGCAAGTCGA TGTCGGAGGA GTTCGGTCCG CGCGGCGTGC GCGTCAAGAC CGTGTCCCCG
GGGCCGGTGC GCACCGCGAT GTGGGAGTCG CCCGACGGCC ACGGCGCCAA ACTGGCCGAG
TCGCTGGGCA TCAGCCACGA GGCGCTGCTG CAGGCGATGC CCGGCCAGCT GGGCCTCACC
ACCGGGCGGC TCGTCGAACC CGAGGAGGTC GCCGCGTTCG TCACCTACCT GACCTCGCCG
CTGGCCGACA GCATCGTCGG CAGCGACCAC CTCATCGACG CCGGAGCCGT CAAGTCGGTC
TAG
 
Protein sequence
MDLQLSRKIA LVTGASRGIG LATVRALEAE GVRVVAASRS ISDGLRSTGA ITIPADLSHP 
DAPAELVAAT IEKLGGLDIL VNNVGGGDGA QLGGLLDFDD ATWRDTFELN FFAAMRTARA
AMPGLLASGG VIVNISSIGA KVPGGNPLPY ASAKAALDAF GKSMSEEFGP RGVRVKTVSP
GPVRTAMWES PDGHGAKLAE SLGISHEALL QAMPGQLGLT TGRLVEPEEV AAFVTYLTSP
LADSIVGSDH LIDAGAVKSV