Gene Snas_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2298 
Symbol 
ID8883492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2441981 
End bp2443168 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511080 
Protein GI291299802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGACC GCGAAGCCGC GAAGAATCGG ATATGGGTTG CCCTGCGCGG CATAGACCTG 
CGCTCGCCCG ATTGGTGGCG CAAGAATGCG CGTTATGTGG CGATCGGCGC GATCGTCGTC
GTACTACTGG GGATCGGCGG CGTCGTGTGG ACAGACTCGG ATGACGATCC GGAAACCGTG
GTCACGCAGT TCTTCGACGC CATCGAGGAC AAGAACGTCG ACCGGGCGCT CAGCTTCGTC
TCGCCCGACG GATACGGGGT GCCCGCTGGC GACGAGGCGG TGTTCCTCGA CGAGGACGCC
ATCAGCGACG ACTGGCGACT CCTGGTGGTC AAGCAGCGAT CCGCGGTCAA GTCCGACGGT
TCCGCCGTCG TGGATGTGGT TCTCGGCGAC GGGAAGTCGA CCAAAGCCGG AGTCATCAAC
GTAGACGATA AGTACGGACA GTGGCAGGTG GTCGATCCGT TCATCAAGGT GCGCTTCGAA
TCGGCTTCGC TGTCGTACCT GAAGGTCAAC GACAAGACCG TGGTCAGGCA GGAACTGTAC
GCCCACGACG TCACGAACCG GGAGGTCCGG GAATACCGGT TGTTCCCGGG GATGAACGCA
TTCTTCGGGA ACCTGAAGGG CACCACCGGC GCGACCGCTC CCGGCAAACT ACTGCTGCCG
ACCGAGAACA GTGGCGACAA GGCATTGCGG GTCTCACCAC CGAAACTCAA ATTCACAGAC
ACCGCGCGCA AGTCGGTCCA AGACGGGGTG GAGGCGATCG TGGACGACTG CGTCAGATTC
GCCATGCCGC AACCGTCGCG GTGCCCGTTC GGTGTCGACA GCCCGCACAC CGACGAGTTC
GGGGTCGCCT ACGGCGATTT CGACGACGTC ACATGGAAGC TAAAGAAGTA TCCGAAGGTG
CGCTTGAAGG ATCCCGGCGA CGACGGCGAC GACACCGGCG GAATGCCCAT CAAGGTCGAC
GATCCCGGAT CCATCTCCCT GACCGCCGCC GCCGTGACCC AGGACGCGGC CTCCAAGGCG
GTCACGCTGA CCGCCGACTG CCGGTTCACC GCCGAACCGC TGCGCGCGGT GCTGGGCCCG
GACGGCAAGG CACGAGTCAT TCCGCTGGGC CAGAGCGGAT CAGAGCTTGC ATCGATATCC
TTCGATCTCG ACACTTGTGG CTCCGACTCG TCTGGGGGTG GATCGTGA
 
Protein sequence
MLDREAAKNR IWVALRGIDL RSPDWWRKNA RYVAIGAIVV VLLGIGGVVW TDSDDDPETV 
VTQFFDAIED KNVDRALSFV SPDGYGVPAG DEAVFLDEDA ISDDWRLLVV KQRSAVKSDG
SAVVDVVLGD GKSTKAGVIN VDDKYGQWQV VDPFIKVRFE SASLSYLKVN DKTVVRQELY
AHDVTNREVR EYRLFPGMNA FFGNLKGTTG ATAPGKLLLP TENSGDKALR VSPPKLKFTD
TARKSVQDGV EAIVDDCVRF AMPQPSRCPF GVDSPHTDEF GVAYGDFDDV TWKLKKYPKV
RLKDPGDDGD DTGGMPIKVD DPGSISLTAA AVTQDAASKA VTLTADCRFT AEPLRAVLGP
DGKARVIPLG QSGSELASIS FDLDTCGSDS SGGGS