Gene Snas_2289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2289 
Symbol 
ID8883483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2430789 
End bp2431964 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content63% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003511071 
Protein GI291299793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG TTGAGCTCAA GAACGTCTCG AAGGTCTTCG CTCCCGACAT CGTCGCGGTG 
GATGACCTGA ACCTATCGGT GAACAACGGT GAGTTCATGG TCCTGCTGGG CCCCTCAGGT
TGCGGAAAGT CGACGATCCT GCGCATGCTC GCGGGCCTTG AGGACACCCT CGACGGGGAC
ATCCTCCTCA ATGGGGAGTT CGCCAACCAC CTGACACCAC GAGAACGTGG GGTCGCCATG
GTGTTTCAGA ACTTCGCCCT GTACCCGCAT TTCCGGGTCG CCGACAACAT CGGCTTTCCG
CTGCGCATCG CGGGAGTCGA TGCCGCCACC ATCAAGGAGC GCACCGTCGC GATGGCCGCG
TCGTTGGGAA TCGAGGACCT GCTCGACCGC AAACCGCACC AGCTGTCGGG AGGTCAGCGC
CAACGGGTCG CCATGGGCCG GGCGCTGATC CGCCATCCCC GGTTCCTGCT CATGGACGAA
CCCTTGTCCA ACCTGGACAT CGGACTTCGC TCGCAGCTGC GCACCGAGAT CGTCGAAATG
GCCCACCGCC TGAACATCAC CACCGTCTAC GTCACCCACG ACCAGACCGA GGCGCTGACC
ATGGCCGACC GAGTGGCGGT ACTGAGACGG GGACGGTTGC AGGACGTCGG CTCCCCTGAC
CAGGTCTACG ACAAACCCGC CACCATGTAC GTGGCGGCGT TCCTGGGCAA CCCCCGCATG
AACCTGGTGC GGGCCTACGT CGAGGTACAC CTCGACCGGT ACGTGACCCT GCATCTGGGA
TCGCAGAGCA TCCGGTTGCC CTGGAGCGAC CTGCAAAGCC GCGGAGTGTC CAAATATCAC
GGTGAACAGA TCGTCGTGGG CATTCGCGCC GAGGCGGTAC GGCCGGTGTC CCACGACCGG
CCCAATGTCC TCAACGGATT GATCCAGTTC ATGGAACACC ACGGACACGA GTCCCTCGTC
CATCTCAGGA TCGGGGCCGT ACCGGTTGAC CACGACGCAC ACTCCCAGCA GCCGGAATCC
GGACGGCACA ACAAACAGAT CTCCGACGTG ACGGTCAGAC TGGCCCCATA TTCACGATGC
CGCCCCGGAC AGGCGATGTC GATCGAGGTT CACACCGACC TGCTGCACTT CTTCGACAGC
AACGGCAACC GCATCGAGGC CGTCCAACGG CGGTAA
 
Protein sequence
MTTVELKNVS KVFAPDIVAV DDLNLSVNNG EFMVLLGPSG CGKSTILRML AGLEDTLDGD 
ILLNGEFANH LTPRERGVAM VFQNFALYPH FRVADNIGFP LRIAGVDAAT IKERTVAMAA
SLGIEDLLDR KPHQLSGGQR QRVAMGRALI RHPRFLLMDE PLSNLDIGLR SQLRTEIVEM
AHRLNITTVY VTHDQTEALT MADRVAVLRR GRLQDVGSPD QVYDKPATMY VAAFLGNPRM
NLVRAYVEVH LDRYVTLHLG SQSIRLPWSD LQSRGVSKYH GEQIVVGIRA EAVRPVSHDR
PNVLNGLIQF MEHHGHESLV HLRIGAVPVD HDAHSQQPES GRHNKQISDV TVRLAPYSRC
RPGQAMSIEV HTDLLHFFDS NGNRIEAVQR R