| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2281 |
|---|
| Symbol | |
|---|
| ID | 8883475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2424374 |
|---|
| End bp | 2425858 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_003511063 |
|---|
| Protein GI | 291299785 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.901195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGT ACGAGCAGAG TTCCGCCGAG CCGGTGGTGG TCATCGGCGC CGGGCCGGTC
GGGTTGGCGG CGGCCGCGCA CCTGGTGGAG CGCGGCATCA CCCCGGTGGT CCTGGAAGCC
GGTTTCGGTC CCGGCGCCGC GATCCGTGAG TGGGGGCATG TGCGGGTGTT CTCGCCGTGG
CGGTTCAACA TCGACGCCGC CGCGCGTCGG TTGCTGGAGG CCGAGGGTTG GAGCGCGCCC
AACGCGGCGC ACCTGCCGAC CGGCGACGAA CTGGTGGACG ACTATCTGAA GCCGTTGGCG
GAACTGCCTC GGTTGGCGCC GCATGTCCAC TTCGACACCC GGGTGGTGGC GGTGGCGCGG
CACGGGATTG ACAAGACCCG CACCGTCGGC CGGGACGGAC GGCCGTATCT GGTGCGTACC
CGTACCGGTG CCGGTGAGTA CCGCGACGTG GTGGCCAGGG CGGTCATCGA CGCGTCGGGC
ACGTGGGGGA AGTCGAATCC CTTGGGGGCG CACGGTCTGC CCGCTCCGGG TGAGGCCGAG
GCCTCGTCCT ATATGGCGGG TGCGCTTCCG GACATCCTGG GCGCCGATCG CGAGCGGTTC
GCCGGTAGGC ACGCGCTCGT GGTCGGCATG GGACATTCGG CGGCCAACGC GCTGCTCGCC
CTGGCGGATC TGGCCGAGGT CGCGCCGGGC ACCCGGATCA CGTGGGTGGT GCGCGGGAGG
TCGGCGGCGC GGTTGTACGG CGGCGGCGAC GCCGACGCGC TGCCGGAGCG CGGCAAGCTG
GGTACCCGGG TCAAGCAGCT GGTCGCCGAC GGCAGGCTCA CCCTCATCAA GAACTTCACC
ATCGACCGCT TCGAACCGGC CACGGACGGC CCGCTGGCGG TGGTGGGGCG GTCCGGTGAC
GAGCCGGTCA AACTCGACGT CGACGTCGTG GTCGCCGCGA CCGGGTTCCG GCCCGATGTG
GACATGTTGC GCGAGGTCCG GCTCGACCTG GATCCGGCGG TGGAGGCACC GAGTCAGTTG
GCGCCGTTGA TCGACCCGAA CTTCCATTCC TGCGGAACCG TTCCGCCGCA CGGCGAGCGG
GTGCTGGCCC ATCCCGACGA GGGTTTCTAC GTCGCCGGGA TGAAGAGTTA TGGCCGGGCC
CCGACGTTCC TGATGGCCAC CGGGTACGAG CAGGTGCGTT CGATAGTCGC GGCCATCGCC
GGGGACCGCG AGGCCGCCGA TGAGGTCCAC CTTGAACTGC CCGAGACCGG GGTGTGTTCC
TCCAGTCCCA CCGTCGAGGA CGCCGACGGC AACGTCACCT TCGCCGAGGC GTCCGGCGGC
TGCGGGACCG GCGACGAGGG GTCGTCGTGC GGCACGGCTG CGGCGCCGCG TGGACTGACC
ACCGGTGTAC TGCACGGCTA CTCCGGTGAG GGCGCGACGC TTCCGGTCGT CCAGGAGGCC
GCGCCGGCGG GCGGCTGTTG CGGCGGCGAA CCCGCCACCG TATGA
|
|---|
| Protein sequence | MSEYEQSSAE PVVVIGAGPV GLAAAAHLVE RGITPVVLEA GFGPGAAIRE WGHVRVFSPW
RFNIDAAARR LLEAEGWSAP NAAHLPTGDE LVDDYLKPLA ELPRLAPHVH FDTRVVAVAR
HGIDKTRTVG RDGRPYLVRT RTGAGEYRDV VARAVIDASG TWGKSNPLGA HGLPAPGEAE
ASSYMAGALP DILGADRERF AGRHALVVGM GHSAANALLA LADLAEVAPG TRITWVVRGR
SAARLYGGGD ADALPERGKL GTRVKQLVAD GRLTLIKNFT IDRFEPATDG PLAVVGRSGD
EPVKLDVDVV VAATGFRPDV DMLREVRLDL DPAVEAPSQL APLIDPNFHS CGTVPPHGER
VLAHPDEGFY VAGMKSYGRA PTFLMATGYE QVRSIVAAIA GDREAADEVH LELPETGVCS
SSPTVEDADG NVTFAEASGG CGTGDEGSSC GTAAAPRGLT TGVLHGYSGE GATLPVVQEA
APAGGCCGGE PATV
|
|---|
| |