Gene Snas_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2260 
Symbol 
ID8883454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2394672 
End bp2395778 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511042 
Protein GI291299764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.39109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC GTACCCTATC GCTCACCACG GCCCTGGTCA CAGGGCTCGC GGTCGTCGCG 
GTACCCATCG CCGCGCAGGC CGCGCCGGAA CGTGCCCCGG TCGTGTCGGC GTCGGTCAAC
AAGGAACTCA CCCAGCGCTT CAACAGCTAC GCCGAGAACG CGGGCCGCTG GACCGGCGCC
GACTCCGCCT ACAGTGTCGA CCTTCCCAAC GGCTCGACGG CGTGGCTGTA CTCCGACACG
TTCCTGGGCG AGGTCGACGA GAACCTGGGC CGCCCCAAGG ATTCGCCGTT CGTCCACAAC
TCGATCATCG TGGACGACGA CGGCGAACTG ACCACCCACA CCGGAGGCAC GAACGCCGCA
CCCGAGTCGC TGGCGAAGGT CGCCGGTGCC GACGAGAAGG AACGCTGGTA CTGGTTCGGC
GACGGCACCG TCGAGGGTGA TTCGCTGCGC GTGATGCTGC TGGAGTTCGT GAAGACCGGC
AGCGGTGTCT TCGACTTCAA GTTCGTCGGC AACGCCGTGG CGAGCTTCGA CACCGACGAC
ATGTCGCTGA CGGGGATCAC GAACCTCCCG AAGTCGGACG TCAACTGGGG TTCGGCGATA
TACGAGGACC GCTCGGACGG CTACACCTAC GTCTTCGGTG TCGAGGACAA GCAGGCCCAG
AAGTACGCCC ACCTGGCGCG GGTGCCGTCC GGCTCCCTCA CCACCGACGA CTGGGAGTAC
TTCGCCGACG GCCAGTGGGG CGACGACCCG ACAGGTTCCA CCCGGATCCT CGAAGGCGTC
TCCAACGAGT TCAGCGTGTC CCGCTTCAAG GGGAAGTTCA CCATCGTCAC CGGTGACGCG
ACCGAGGCGC TCAGCGCCAA GATCGTGATG TACCGCGGCG CCGACATCGA GGGGCCGTAC
ACCGGCAAGA CCGTCTTGTA CCAGACTCCG GAGACCAGCG GCAACGTCTT CACCTACAAC
GCCAAGGCGC ACCCGAACCT CAGCAGCGGG AACCGGCTGC TGGTGACGTA CAACGTCAAC
AGCTTCCGGC CCGACGACCT GTACGAGGAC GCCACCATCT ACCGCCCTCG CTACATCGAC
GTCACCGTGA AGAACCTCAA GGGCTGA
 
Protein sequence
MITRTLSLTT ALVTGLAVVA VPIAAQAAPE RAPVVSASVN KELTQRFNSY AENAGRWTGA 
DSAYSVDLPN GSTAWLYSDT FLGEVDENLG RPKDSPFVHN SIIVDDDGEL TTHTGGTNAA
PESLAKVAGA DEKERWYWFG DGTVEGDSLR VMLLEFVKTG SGVFDFKFVG NAVASFDTDD
MSLTGITNLP KSDVNWGSAI YEDRSDGYTY VFGVEDKQAQ KYAHLARVPS GSLTTDDWEY
FADGQWGDDP TGSTRILEGV SNEFSVSRFK GKFTIVTGDA TEALSAKIVM YRGADIEGPY
TGKTVLYQTP ETSGNVFTYN AKAHPNLSSG NRLLVTYNVN SFRPDDLYED ATIYRPRYID
VTVKNLKG