Gene Snas_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2249 
Symbol 
ID8883443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2384323 
End bp2385585 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content73% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003511032 
Protein GI291299754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.795375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.159293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCG ACACCTCAAA GCCCGGCCCG GTATGGGCCG TGCTTCGCCG CGCGCTGGTG 
GCGACCAAGT GGATGCTCGC GGGCATGGGG ACCTCGATGC TGGCGGTGCT GGGCTGGGCG
CTGGTGGTGC TGATCGCGGG GCTGAGCCTC CTCGGGGTCG GACTGTTGCT GCTGCGGCCC
GCGCTGCTGG TGATCCGGCG CATCGCCGAC CTGGAACGCG CCCGGCTCAA CCGGATGGGC
AAGCCGGTGA CCGCGTCCTA CGCCGAACTG CCGTACCCGC CGCTTCAGGT GCTGCGCGCC
CTCGCCGAGG ACCCGTCCAA CCGCCGCGAC CTGGCCTGGC TGGTGCTGCA CGGCAGCTAC
GGCTTCCTGC TGGCCTCACT GGCGCTGCAA GCGCCGGTCA ACGTGCTGCG CGAACTGTCC
TTCCCACTGT GGTGGACGCT GGTCCCGCCG GAGGAATCCA ACGCGCTCAA CGGTTTCATC
GACATCAGCA CCTGGACCGG AGCCTGGCTG GTCTTCGCCA CCGCTCCACT GTGGTTCATA
CTGTGGCTGG TGGTGACACC GCTGCTGACC GGACCGCAGG CCCTGCCGGG CGTCCGGCTG
CTCAACCCGC ACCCCGACAT CGACCTGTCG GCCCGGCTCG CCCAGCTGAC CGCCACCCGG
GCCGCCGCCC TGGACGCCCA CGCCGTCGAA CTGCGCCGCA TCGAACGCGC CCTGCACGAC
GGCGCCCAGA ACCGGCTCGT CGGCGTCGCG GTCCTGGTGG GTGCCGCCCG GCAGGCGCTG
CGCCGCGACC CCGACCACGC CGACGCCGTC CTGGAACGCG CCCAGAGCAC CGCCGAGGAC
GCGCTGGCCG AACTGCGTTC GGTGGTGCGC AGCATCCTGC CGCCGGTGCT GGAGAACCGG
GGCCTGTCCG GCGCCCTGTC GGCACTGGCC GCCGACAGCC CGGTGCCGTG CCACCTCCAG
GTGGACGTGC CGGTGCGCTG CCCGGTCAGC GTCGAGGCCA CCGCCTACTT CGCCGTCGCC
GAAGCCCTCA CCAACGCCGC CAAACACAGC CGCGCCACCC GCGTCGACAT CACCGTCGTG
CGCGTCGGTG ACCGGCTCAC CGCCACCGTC ACCGACGACG GCACCGGCGG CGCCGAACCC
GACACCGGCA CCGGCCTGTC GGGAATCCGC CGCCGCGTCG CCGCCCACGA CGGAACCACC
ACCATCACCA GCCCGCCCGG CGGGCCGACC GTCATAGAAG TGGAGCTGCC GTGCGGATCG
TGA
 
Protein sequence
MTRDTSKPGP VWAVLRRALV ATKWMLAGMG TSMLAVLGWA LVVLIAGLSL LGVGLLLLRP 
ALLVIRRIAD LERARLNRMG KPVTASYAEL PYPPLQVLRA LAEDPSNRRD LAWLVLHGSY
GFLLASLALQ APVNVLRELS FPLWWTLVPP EESNALNGFI DISTWTGAWL VFATAPLWFI
LWLVVTPLLT GPQALPGVRL LNPHPDIDLS ARLAQLTATR AAALDAHAVE LRRIERALHD
GAQNRLVGVA VLVGAARQAL RRDPDHADAV LERAQSTAED ALAELRSVVR SILPPVLENR
GLSGALSALA ADSPVPCHLQ VDVPVRCPVS VEATAYFAVA EALTNAAKHS RATRVDITVV
RVGDRLTATV TDDGTGGAEP DTGTGLSGIR RRVAAHDGTT TITSPPGGPT VIEVELPCGS