| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2243 |
|---|
| Symbol | |
|---|
| ID | 8883437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2377156 |
|---|
| End bp | 2378715 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_003511026 |
|---|
| Protein GI | 291299748 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.739942 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.153566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGACT CCCTATCCGA GCGCCTATCC GGCATTTTCA ACAGCCTGCG TGGCAAGGGT
CGCCTCTCGG AGGCCGACAT CGACGCCACC GCGCGCGAGA TCCGCATGGC GCTGCTGGAG
GCCGACGTCG CGCTTCCGGT GGTGAAGTCG TTCATTCACA ACGTCAAGGA ACGGTGCCGG
GGCGCGGAGG TCTCCAAGGC GCTCAACCCG GGCCAGCAGG TCATCAAGAT CGTCAATGAG
GAACTCATCA CGATCCTGGG CGGCGAGGCC CGGCGGCTGA GCTTCGCCAA GAACCCGCCG
ACGGTGATCA TGCTCGCCGG TCTGCAGGGT GCCGGTAAGA CGACGCTGGC GGGCAAGCTC
GCCAAATGGC TCAAGGACCA GAACCACCAG CCGATGCTGG TCGCCGCCGA CCTCCAGCGG
CCCAACGCGG TGCAGCAGCT GCAGGTGCTC GGTGAGCGCG CCGGTGTCGA GGTGTACGCC
CCCGAGCCCG GCTCGGGTGT CGGTGACCCG GTCAAGGTCG CCAAGGAGTC GCTGGCCCAC
GCCACCCGCC ACGCCCGCGA CATCGTCATC ATCGACACCG CCGGCCGCCT GGGCGTCGAC
GAGGAGATGA TGGCGCAGGC CGCCGCGATC CGCGACGCCA CCAACCCCGA CGAGACCCTG
TTCGTCATCG ACGCGATGAT CGGTCAGGAC GCCGTGGCCA CCGCCGAGGC GTTCCGCGAC
GGCGTCGGCA TCTCCGGCGT CGTCCTGTCG AAACTGGACG GTGACGCCCG CGGTGGTGCG
GCGCTGTCGG TGCGGCAGGT CACCGGCCAG CCGATCATGT TCGCGTCCAT CGGCGAGAAG
CTGGAGGACT TCGACGTCTT CTACCCCGAG CGGATGGCCT CGCGCATCCT CGGCATGGGA
GACGTGCTGA CGCTCATCGA GCAGGCCGAG ACGGCCTTCG AGGACGAGCA GAAGCAGCGC
ATGACCAGCA AGCTGCTCGG CGGCGAGAGC TTCACCCTCG AGGACTTCCT GGAGCAACTG
CAGGCGATCC GCAAGATGGG CCCGATCGGG AACCTGCTGG GCATGATGCC GGGCATGTCC
CAGATGAAGG ACCAGATCGC CGACATCGAC GACAAGCACC TGGACAAGGT CGCCGCGGTG
ATCCGCTCCA TGACGCCGCA GGAACGCGCC GAACCCAAGA TCATCAAGGG CTCGCGCCGC
ATCCGCATCG CCAACGGTTC GGGCACCACC GTCAACGACG TCAACCAGAT CCTGACCCGC
TTCGGCGAAG CCCAGAAGAT GATGAAGCAG ATGGGCGGCA TGATGGGTCT GCCCGGCGGC
CGCCGCAAGG CCACCAAGTC GCCCAACATC AAACGCAAGG GCAAGAAGGG CAAAGTCACC
AAGAAGAAGG CGCGCGGTGG CGGCGGCATG CCCGCGGGGA TGCCGCAGGG TATGCCCGGC
GGCGGAATGC CGGGGCAACT GCCGCAGGGC TTCGACCCGT CCGCGCTCGG TGGCGGCCAG
GTCGACGTTC CCGAAGTGGA CTTCGGCGCC CTGAAACCCA AGAAGGGCAA GAAGAAGTAG
|
|---|
| Protein sequence | MFDSLSERLS GIFNSLRGKG RLSEADIDAT AREIRMALLE ADVALPVVKS FIHNVKERCR
GAEVSKALNP GQQVIKIVNE ELITILGGEA RRLSFAKNPP TVIMLAGLQG AGKTTLAGKL
AKWLKDQNHQ PMLVAADLQR PNAVQQLQVL GERAGVEVYA PEPGSGVGDP VKVAKESLAH
ATRHARDIVI IDTAGRLGVD EEMMAQAAAI RDATNPDETL FVIDAMIGQD AVATAEAFRD
GVGISGVVLS KLDGDARGGA ALSVRQVTGQ PIMFASIGEK LEDFDVFYPE RMASRILGMG
DVLTLIEQAE TAFEDEQKQR MTSKLLGGES FTLEDFLEQL QAIRKMGPIG NLLGMMPGMS
QMKDQIADID DKHLDKVAAV IRSMTPQERA EPKIIKGSRR IRIANGSGTT VNDVNQILTR
FGEAQKMMKQ MGGMMGLPGG RRKATKSPNI KRKGKKGKVT KKKARGGGGM PAGMPQGMPG
GGMPGQLPQG FDPSALGGGQ VDVPEVDFGA LKPKKGKKK
|
|---|
| |