Gene Snas_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2240 
Symbol 
ID8883434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2374031 
End bp2374405 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content66% 
IMG OID 
ProductCupin 2 conserved barrel domain-containing protein 
Protein accessionYP_003511023 
Protein GI291299745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.130311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0267337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTAA TGCCAGCCTC TGAAGCCAAG GTCCACGAGT TCGACGGCAG CCGTTGGAAA 
GCCTTCGTCG CGCCCAGCAA GGGCAGCACC GAACTGTGCG CCTGGCGCGC CGAGATCCCC
GCCGACGCCA AGACCTCGCC GCACCGGGTC AACAAGGAAG AGGTGCTGTT GGTCCTCAAG
GGCCGCCTGC GGATGGTCCA CGAGGGTTGC GACCTGATCG CTGAGTCGGG CGACGCCATC
GTGGTGCCGC CCGACACGGA TGTCCACATC ACCAACGTCG GGGACGAAAC GGCCGAAACC
TGGGTGACGA CCAGTGTCGG CTTCGCCGGG ACCATGCCCG ACGGAAGCGT GTTCACCCCG
CCGTGGGTGC AGTAA
 
Protein sequence
MPVMPASEAK VHEFDGSRWK AFVAPSKGST ELCAWRAEIP ADAKTSPHRV NKEEVLLVLK 
GRLRMVHEGC DLIAESGDAI VVPPDTDVHI TNVGDETAET WVTTSVGFAG TMPDGSVFTP
PWVQ