Gene Snas_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2229 
Symbol 
ID8883423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2363724 
End bp2364659 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511012 
Protein GI291299734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0795429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00439398 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCTGGG TGGCCTGGAG ACAACATCGC GCCGGAGTGC TCACGGCATT GGCTGTGCTC 
GCCACGGCGG CCACCGTCAT GCTGGTGATG CGGCTCAGCA TCGACGCAGC GTTCGCGAAA
GCGAAGGCAC CGGACTGTCT GACCAATCCC GGCAGTTGCA CGGAAGACGC GTTCAACGCT
GTGATGAACA GCTACGGGAT GTACGTGACG ATGGCGCCGA CGGTGCTGTA CCTCTTCCCG
GTGCTGCTGG GCATCGTCGC CGGGGCGCCG GTGTTCGCCC GGGAACTGTC CCTGGGCACC
CACATGTTCA GCCTCACCCA GTCGGTCTCA CGGAAACGCT GGTGGGCGGT GAAACTGGGC
GTCACCCTCC TGCCGATTGC GGTGGGGACC TGTTTGCTCG GCCTGTTGTC GGCGTGGGCG
ATCGGGCCAC TCGTCAATAT GTTGGGCGGC CGGATACAGC CGGGATTCTT CGAGGTTCAG
GGCCTGGTCA TGGCCGGATA CATGGTGTTC GCGTTCGCGG TGGCCTCGAC CTTCGGTCTG
CTGACCCGGA ACAACGTGGT TCCCATGGTC GTCACGGCAG GGGTGTTCAT CGCCGTCGCG
GTCACCGTGG CGGTGTTCGC ACGACCGTCG TATCTCCCGG CGGAGCAGGC CACGGTCACG
AACCCCAAGG GCCAAGACGA GTTCGCGGTG CAGACGCCCG AGCACTCGTG GCGGGTCGGC
GAGATCTTTG TGGACAAGGA CGACAACACC TACACGAGCT ATGCCGAAGT CTGCAACCCG
GAATCGTGCG TTGAGGACGA CGTGGTCTCC TACACCGTCG AATACCACCC CGACTCCCGG
TTCTGGACCT TCCAGGGCAT CGAGACCGGT GCCTATCTCG TACTCGGCGC CGCGGCACTG
GCCGTGGGAG CCCGTCGGTT GCGCGCCCTG CCATAA
 
Protein sequence
MIWVAWRQHR AGVLTALAVL ATAATVMLVM RLSIDAAFAK AKAPDCLTNP GSCTEDAFNA 
VMNSYGMYVT MAPTVLYLFP VLLGIVAGAP VFARELSLGT HMFSLTQSVS RKRWWAVKLG
VTLLPIAVGT CLLGLLSAWA IGPLVNMLGG RIQPGFFEVQ GLVMAGYMVF AFAVASTFGL
LTRNNVVPMV VTAGVFIAVA VTVAVFARPS YLPAEQATVT NPKGQDEFAV QTPEHSWRVG
EIFVDKDDNT YTSYAEVCNP ESCVEDDVVS YTVEYHPDSR FWTFQGIETG AYLVLGAAAL
AVGARRLRAL P