Gene Snas_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2216 
Symbol 
ID8883409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2355297 
End bp2356271 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID 
Productphosphate ABC transporter inner membrane subunit PstC 
Protein accessionYP_003511000 
Protein GI291299722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.100122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.140551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACCA TCGACCGCCC CACCTCCCCC GGTATCACTG AACCGGGCAA GGGGCGCACC 
CTCGATACCG GCTTCCGCGT CCTGGTCTTC GTGGCGGGAC TGCTGGTGCT GGCCATTCTG
CTGGCCATGC TCATCACCAC CACGAGCCAG TCGCTGCCCG CCCTTCAGAC CAGCGGCCTC
GACTTCATCC TCTCCACCCG CTGGGCCCCC AACAAGGACG TCTTCGGCGT CGGCGCTTTC
GTCTACGGAA CCGTGATCTC CTCGGTGATC GGGCTGATCA TCGCCATCCC GATCTCGGTG
GGCATCGCGC TGTTCCTGAC CGAGCTGGCG CCCCGGTGGC TGCGCACCCC CGCGGTGACC
GTCATCGACC TGCTGGCCTC GGTGCCGTCG GTCGTGTTCG GCCTGGTCGG CATCGCCGTC
ATCGCGCCGG GCATCCTGCC GGTCTACCAG GGCATCAACA ACGTGTTCGG CGACATCCCC
GTGATCGGAG CGCTGTTCGG CGACACCAAC AGCGGCCGTA ACTTCTTCAC CGCCGGGATC
ATCCTGGCCG TGATGGTCAT CCCGATCATC ACCTCGATCT CCCGCGAGGT CTTCGACACC
GTTCCGGTCG CCGACAAGCA GGCCGCCTAC GCTCTGGGCG CCACCCGCTG GGAGATGATC
AAGGGCGCTG TCTTCCCGCA CAGCTTCGGC GGACTCGTCG GTGGGTCGAT GCTTGGTCTC
GGCCGCGCGA TGGGCGAGAC CATCGCCGTG TCGCTGGTCA TCGGGTCCTC CACCCAGATC
ACCGCGAACC TGTTCGACTC CGGTAACTCC ATGGCCTCGG TCATCGCTCA GCAGTGGGGT
GAGGCAGGGC CGCTGCACGC CTCCGCCCTG ATCGGTATCG GGGTGCTGCT GTTCATCATG
ACCGTCGTGG TCAACTTCGC CGCCCGCGCG ATCGTCCGTC GCGCCGAAGT CCGAATGCGA
GGTGCGGCCT CATGA
 
Protein sequence
MTTIDRPTSP GITEPGKGRT LDTGFRVLVF VAGLLVLAIL LAMLITTTSQ SLPALQTSGL 
DFILSTRWAP NKDVFGVGAF VYGTVISSVI GLIIAIPISV GIALFLTELA PRWLRTPAVT
VIDLLASVPS VVFGLVGIAV IAPGILPVYQ GINNVFGDIP VIGALFGDTN SGRNFFTAGI
ILAVMVIPII TSISREVFDT VPVADKQAAY ALGATRWEMI KGAVFPHSFG GLVGGSMLGL
GRAMGETIAV SLVIGSSTQI TANLFDSGNS MASVIAQQWG EAGPLHASAL IGIGVLLFIM
TVVVNFAARA IVRRAEVRMR GAAS