Gene Snas_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2200 
Symbol 
ID8883393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2339734 
End bp2340468 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID 
Producturidylate kinase 
Protein accessionYP_003510984 
Protein GI291299706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.301448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG CCGAGCGTCG ACCGTACCGG CGCGTGGTAC TGAAACTGTC GGGAGAGGTC 
TTCGGAGGCG GGGCGGTCGG TGTGGATCCC GACGTCGTCG CCGGTATCGC CGCACAGATC
ACCAAGGCCA GCAAATCCGG CGTACAGGTC GCGGTGGTCG TGGGTGGCGG CAACTTCTTC
CGGGGCGCCG AACTGCAGCG CCGCGGCATG GAACGCAGCC GCGCCGACTA CATGGGAATG
CTCGGCACCG TCATGAACTG TCTGGCGCTC CAGGACTTCC TGGAGAAGGA GGACGTCGAG
ACCCGGGTGC AGACGGCCAT CACGATGGCC CAGGTCGCCG AGGCGTACAT CCCGCGCAAG
GCCATGCGCC ACCTGGAGAA GGGCCGCGTG GTCATCTTCG GCGCCGGTGC GGGCCTGCCC
TACTTCACCA CCGACACCGT CTCGGCGCAG CGCGCCCTGG AGATCAAGGC CGACGCCGTC
CTGATGAGCA AGAGCGGCGT CGACGCGGTC TACACCGCCG ACCCGCGCAT CGACCCCAAC
GCCGAACGCC TGGAGACCAT CACCTTCGAC GAGGTGCTGC AACGCCGCCT GCAGGTGGCC
GACCAGGCCG CCTTCAGCCT GTGCCAGGAC AACGATCTGC CCATTGTGGT ATTCGGCGCC
GAGGTCGAGG ACGGCATATC CAGGGCCTTG TGCGGCGAGC GGATCGGGAC GCTCATAACC
TCGGCCCGTC CCTAG
 
Protein sequence
MADAERRPYR RVVLKLSGEV FGGGAVGVDP DVVAGIAAQI TKASKSGVQV AVVVGGGNFF 
RGAELQRRGM ERSRADYMGM LGTVMNCLAL QDFLEKEDVE TRVQTAITMA QVAEAYIPRK
AMRHLEKGRV VIFGAGAGLP YFTTDTVSAQ RALEIKADAV LMSKSGVDAV YTADPRIDPN
AERLETITFD EVLQRRLQVA DQAAFSLCQD NDLPIVVFGA EVEDGISRAL CGERIGTLIT
SARP