Gene Snas_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2187 
Symbol 
ID8883380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2327841 
End bp2328626 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID 
Productsignal peptidase I 
Protein accessionYP_003510972 
Protein GI291299694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0439967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCAC GAGACCATAA CTGTGCGTAC ACTGCTTGCG TGATTGACGA TGACTCGTCG 
ACCCGCGCAG GCGCCGACGA ACCCGAGGAG GACAAGAAGG GTTCGTTCTG GCGCGAGCTT
CCCGTCCTGC TGGCCATCGC CGTGGTGGTG GCGCTGGTGG TGCGCACCTT CGCGTTGCAG
TCGTTCTGGA TCCCGTCCGG TTCGATGGAG AACACCCTGC AACGTGGCGA CCGGGTGCTG
GTCAACAAGC TGATCTACGA CTTCCGGGAA CCCGAACGCG GCGAGGTCAT CGTGTTCAAG
GCCCCGCAGT CGTGGCGCGG CGAGCCCGGC GACGAGGACT TCATCAAACG CGTCATCGCC
GTGGGCGGTG ACACCGTGTC CTATGACGCC GGTGACGGGC AGATCGCCGT CAACGGGGAG
CCGCTCGACG AATCGTCCTA TATCTACACC GACCCCACGA CCGGTGAACA GGACCTGGCC
AGCAAGGACG GCTACGAGTT CAGCGTGACC GTCCCCAAGG GCCGGTTGTG GGTGATGGGC
GACCACCGCG GCTCCTCCGG GGATTCGCGC GAGAACTACA TCCGCGGCGG CGAGGACGTC
CAGCGCGCCA CCATCCCGGT CGACTCGGTG GTGGGCAAGG CGTTCCTGCT GATGTGGCCG
GTGGCGCACT GGAAATGGCT GTCGGTGCCC GACACCTACA GCGGCATCCC GCCGCCGAAG
GCCAGCGAAT TATCGGGGTC CTGCCAGGCT GGCCGCGTGA GGCACCCACG TAAGCTCTTT
GCGTGA
 
Protein sequence
MWSRDHNCAY TACVIDDDSS TRAGADEPEE DKKGSFWREL PVLLAIAVVV ALVVRTFALQ 
SFWIPSGSME NTLQRGDRVL VNKLIYDFRE PERGEVIVFK APQSWRGEPG DEDFIKRVIA
VGGDTVSYDA GDGQIAVNGE PLDESSYIYT DPTTGEQDLA SKDGYEFSVT VPKGRLWVMG
DHRGSSGDSR ENYIRGGEDV QRATIPVDSV VGKAFLLMWP VAHWKWLSVP DTYSGIPPPK
ASELSGSCQA GRVRHPRKLF A