Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2183 |
Symbol | |
ID | 8883376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2325094 |
End bp | 2325603 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_003510968 |
Protein GI | 291299690 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.141383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGG TGGTTGGGCG TATCGTCCGG TCTCACGGGG TCCGAGGCGA CCTGATCGTC GAGGTCCGGA CGGACGAACC CGAACAACGT TTCGCGGGCG GGTCGGTGTT GCACACCGAC CCGCCCCGCT TTGGCCCCGT CACCGTGGAA CGGGTGCGCT GGTACCAGGA GCGGCTGCTG TTGACCCTCG AGGGGGTCGC CGACCGGGAC GCCGCCGAGG CGATGCGCGG CGTCGCGCTC ACCGTGGACA GTGAGGACGT CGAGGTGCCC GAGGACCCGG ACGAGTTCCG CGACCTCGAC CTCGTCGGGC TGTCCGTTGT GGAGGAATCC GGCGCCGAGA TCGGCACCGT CGTGCGGGTC GAGCACGCTC CCGCCCACGA CCTGCTGGTC GTCGACCGTC CCGGCGCCAA CCAGGCGCTG ATCCCGTTCA TCCAGGCCAT GGTGCCCACC GTCGACGTGG CGGGCGGCCG GATCGTCGTG ACCCTGCCCG AGGGTCTGCT GGACCTGTGA
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Protein sequence | MKLVVGRIVR SHGVRGDLIV EVRTDEPEQR FAGGSVLHTD PPRFGPVTVE RVRWYQERLL LTLEGVADRD AAEAMRGVAL TVDSEDVEVP EDPDEFRDLD LVGLSVVEES GAEIGTVVRV EHAPAHDLLV VDRPGANQAL IPFIQAMVPT VDVAGGRIVV TLPEGLLDL
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