Gene Snas_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2183 
Symbol 
ID8883376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2325094 
End bp2325603 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID 
Product16S rRNA processing protein RimM 
Protein accessionYP_003510968 
Protein GI291299690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.141383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG TGGTTGGGCG TATCGTCCGG TCTCACGGGG TCCGAGGCGA CCTGATCGTC 
GAGGTCCGGA CGGACGAACC CGAACAACGT TTCGCGGGCG GGTCGGTGTT GCACACCGAC
CCGCCCCGCT TTGGCCCCGT CACCGTGGAA CGGGTGCGCT GGTACCAGGA GCGGCTGCTG
TTGACCCTCG AGGGGGTCGC CGACCGGGAC GCCGCCGAGG CGATGCGCGG CGTCGCGCTC
ACCGTGGACA GTGAGGACGT CGAGGTGCCC GAGGACCCGG ACGAGTTCCG CGACCTCGAC
CTCGTCGGGC TGTCCGTTGT GGAGGAATCC GGCGCCGAGA TCGGCACCGT CGTGCGGGTC
GAGCACGCTC CCGCCCACGA CCTGCTGGTC GTCGACCGTC CCGGCGCCAA CCAGGCGCTG
ATCCCGTTCA TCCAGGCCAT GGTGCCCACC GTCGACGTGG CGGGCGGCCG GATCGTCGTG
ACCCTGCCCG AGGGTCTGCT GGACCTGTGA
 
Protein sequence
MKLVVGRIVR SHGVRGDLIV EVRTDEPEQR FAGGSVLHTD PPRFGPVTVE RVRWYQERLL 
LTLEGVADRD AAEAMRGVAL TVDSEDVEVP EDPDEFRDLD LVGLSVVEES GAEIGTVVRV
EHAPAHDLLV VDRPGANQAL IPFIQAMVPT VDVAGGRIVV TLPEGLLDL