Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2177 |
Symbol | |
ID | 8883370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2321158 |
End bp | 2321850 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | coenzyme PQQ biosynthesis protein C |
Protein accession | YP_003510962 |
Protein GI | 291299684 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.744366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGGGG ACACGTTGGA CGCCGACGAG TTCACCGCCG AGCTGCGCGG ACTGTCCAAT CGTTACTGGG GAAGCCACCC GTTCCACATA AGACTTCACA GCGGGGAGCT CTCGAAGGAC GAGTTGCGGC TGTGGGCCGC CAACCGCTGG TACTACCAGT CGATACTGCC GCAGAAGGAC GCCGCGATCA TCGCGAACTG TCCCGACCGC GAGGTGCGGC GGCTGTGGGT CGACCGGATC GTCTACCACG ACGGCCGTCC CGGCGACGAG GGCGGCGCCG ACCGGTGGCT GCGGCTGTGC GAGGCGATCG GGCTGGACCG CGGCGAGGTC GTCGACCTGC GGCACCTGCT GCCGGGGGTG CGGTTCGCGG TGGACGCGTA CCTGAACTTC GCCCGGAACC GGCCCTGGCT GGAGGCGGTG GCCTCGGGGC TGACCGAGAT GTTCTCCGGG CACCTGATGC GCCGCCGCGT CGACGACATG CTGGCGGCCT ATCCGTGGAT CCGGCCCGCC GACCTGGAGT ACTTCAGCAA CCGCATCGGC GCGGTGTCCG ACGAGGGCGC GACCGCCCTG GACATCGTGG TGCGCCACAG CCTCACCCGC GAGCAGCAGC GCGCCGCGGT GTCGGCGCTG TCGTTCAAGT GCGACGTGCT GTGGTCCATG CTGGACGCCA TCGCCGCGGG GGCGCGGCCA TGA
|
Protein sequence | MHGDTLDADE FTAELRGLSN RYWGSHPFHI RLHSGELSKD ELRLWAANRW YYQSILPQKD AAIIANCPDR EVRRLWVDRI VYHDGRPGDE GGADRWLRLC EAIGLDRGEV VDLRHLLPGV RFAVDAYLNF ARNRPWLEAV ASGLTEMFSG HLMRRRVDDM LAAYPWIRPA DLEYFSNRIG AVSDEGATAL DIVVRHSLTR EQQRAAVSAL SFKCDVLWSM LDAIAAGARP
|
| |