Gene Snas_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2175 
Symbol 
ID8883368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2319711 
End bp2320763 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content69% 
IMG OID 
Productcoenzyme PQQ biosynthesis protein E 
Protein accessionYP_003510960 
Protein GI291299682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.842186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCCG AACTGACGCA CCGCTGCCCG CTGCACTGTC CATACTGTTC CAATCCCTTG 
GAGCTGTTGG GCCGCGACAG TGAACTGTCC ACGAAGCAGT GGATCTCGGT ACTGGACCAG
GCGCGGGAGC TCGGCGTGTT GCAGGTGCAC TTCTCCGGCG GGGAACCGTT GGCGCGCAAG
GATCTGCCCG AGCTGGTCGC GCACGCCTCC GGGTTGGGTC AATATGTCAA CCTGGTCACC
AGCGGGCTGG GCCTGACCGA GGAACGACTG TCCGACCTGG CGGGACGAGG GCTCAACCAC
GTCCAGCTGT CGGTACAGGA CGCCGAACCG GAATCGGCGA ACCTGCTGGC CGGGACCCGG
GCGCACGCGC ACAAGATCAC CGCCGCTCGC CTGGTCAACG CCGCCGGGTT GCCGCTGACC
GTCAACGTGG TGCTGCACCG GGGGAACATC GACCGGATCG GCGCGATCAT CGACTTCGCC
GAGGAACTGG GTGCCCAGCG GCTGGAACTG GCCAACACCC AGTACTACGG CTGGGCGCTG
CGCAACCGCG ACGCCCTGCT GCCCAGCCGG GCCCAGCTGG ACGCGGCGGC GCTGGTGGTC
CGTGAGGCCA GCGAGCGGCT GTCGGAGCGG CTGGACCTCA TCTACGTGCT GGCCGACTAC
TACGCCGACC GTCCCAAGCC GTGCATGTAC GGCTGGGGTT CGCGGCAGTT CACGGTGGCG
CCCGACGGGG ACGTGCTGCC GTGCCCGGCC GCCACCGCCA TCACCGACCT GAGGATGGAC
AACGTCACCA CCACCGCCCT GGCCGACATC TGGTACCGCT CGGACTCGTT CAACGCCTTC
CGGGGACAGG AGTGGATGCG CGAGCCGTGC CGCAGTTGCG ACCGGCGCGA GATCGACTTC
GGCGGCTGCC GCTGCCAGGC GTTCCTGTTC ACCGGCGACG CCACCAGCAC CGACCCGGTG
TGCGGGCTGT CCCCCGACCG CCATCTCATT GACGCGATAC TGGAAGCCGA CGCCGTCGCA
CCGGCGTTCG TGATGCGAAA GGCCGCGCCG TGA
 
Protein sequence
MLAELTHRCP LHCPYCSNPL ELLGRDSELS TKQWISVLDQ ARELGVLQVH FSGGEPLARK 
DLPELVAHAS GLGQYVNLVT SGLGLTEERL SDLAGRGLNH VQLSVQDAEP ESANLLAGTR
AHAHKITAAR LVNAAGLPLT VNVVLHRGNI DRIGAIIDFA EELGAQRLEL ANTQYYGWAL
RNRDALLPSR AQLDAAALVV REASERLSER LDLIYVLADY YADRPKPCMY GWGSRQFTVA
PDGDVLPCPA ATAITDLRMD NVTTTALADI WYRSDSFNAF RGQEWMREPC RSCDRREIDF
GGCRCQAFLF TGDATSTDPV CGLSPDRHLI DAILEADAVA PAFVMRKAAP