Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2160 |
Symbol | |
ID | 8883353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2305927 |
End bp | 2306667 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Clp domain-containing protein |
Protein accession | YP_003510946 |
Protein GI | 291299668 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.520104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACT CACTTCCCGT CCGACTGGAC GACCTCATCG GCCACATCAC CACCAACCAC CCCGACGGGG ACGCGCTGGC GCAGCTGTCG GACGCCTGCC GGATCGCGAT GGTCCTCGAC GAGCAGGCCG ACCACCTCAT CGGCCACTTC GTCGACCGGG CCCGCCGCTC CGGAGCCTCC TGGAGCGCCA TCGGCCAGCA CATGGGGGTG TCCAAACAGG CCGCGCAGAA GCGCTTCGTC ACCGGCCCCG GGGACTTCAG CCTCGGCGAC GCGGACGACG GCAAGCTGTC GCGCTTCACC GGACGCACCA AGATCGTCCT GGAGAAGGGC CACCTGACGG CCCGCAACCT CAAGCACTCC CCCGTAGAGC CGATCCACCT GCTGCACGGC CTCGCCGAGG AGCCCTCGAC GCTGGCGGCC AAGGTGCTGG AATCCATGGG CGTCACGATC GAGCAGCTGC ACGACAGGGT GTCCGAGGCG CTCGACGCGC CCGGGCAGGG CGCCTACGCC ACCGGCGACA TCCCGCTGTC GCCCGACAGC GTCGAGACGC TGAAGCTGAC GGTGCGCGAG GCGCTGGGCA TGGGCCACAA CTACGTCGGC ACCGAACACC TGCTGCTGGG ACTGCTGGCC GCCGAGGGCA CCCCCGCCGA GATTCTGGGC GGGCTGGGCG TCGGCCACGA TGCCGCCAAG GAGCGGGTGC TGGCCGCCCT TGACGCCCTG ATGAACACGA AATCCACATA G
|
Protein sequence | MTNSLPVRLD DLIGHITTNH PDGDALAQLS DACRIAMVLD EQADHLIGHF VDRARRSGAS WSAIGQHMGV SKQAAQKRFV TGPGDFSLGD ADDGKLSRFT GRTKIVLEKG HLTARNLKHS PVEPIHLLHG LAEEPSTLAA KVLESMGVTI EQLHDRVSEA LDAPGQGAYA TGDIPLSPDS VETLKLTVRE ALGMGHNYVG TEHLLLGLLA AEGTPAEILG GLGVGHDAAK ERVLAALDAL MNTKST
|
| |