Gene Snas_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2160 
Symbol 
ID8883353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2305927 
End bp2306667 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID 
ProductClp domain-containing protein 
Protein accessionYP_003510946 
Protein GI291299668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.520104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CACTTCCCGT CCGACTGGAC GACCTCATCG GCCACATCAC CACCAACCAC 
CCCGACGGGG ACGCGCTGGC GCAGCTGTCG GACGCCTGCC GGATCGCGAT GGTCCTCGAC
GAGCAGGCCG ACCACCTCAT CGGCCACTTC GTCGACCGGG CCCGCCGCTC CGGAGCCTCC
TGGAGCGCCA TCGGCCAGCA CATGGGGGTG TCCAAACAGG CCGCGCAGAA GCGCTTCGTC
ACCGGCCCCG GGGACTTCAG CCTCGGCGAC GCGGACGACG GCAAGCTGTC GCGCTTCACC
GGACGCACCA AGATCGTCCT GGAGAAGGGC CACCTGACGG CCCGCAACCT CAAGCACTCC
CCCGTAGAGC CGATCCACCT GCTGCACGGC CTCGCCGAGG AGCCCTCGAC GCTGGCGGCC
AAGGTGCTGG AATCCATGGG CGTCACGATC GAGCAGCTGC ACGACAGGGT GTCCGAGGCG
CTCGACGCGC CCGGGCAGGG CGCCTACGCC ACCGGCGACA TCCCGCTGTC GCCCGACAGC
GTCGAGACGC TGAAGCTGAC GGTGCGCGAG GCGCTGGGCA TGGGCCACAA CTACGTCGGC
ACCGAACACC TGCTGCTGGG ACTGCTGGCC GCCGAGGGCA CCCCCGCCGA GATTCTGGGC
GGGCTGGGCG TCGGCCACGA TGCCGCCAAG GAGCGGGTGC TGGCCGCCCT TGACGCCCTG
ATGAACACGA AATCCACATA G
 
Protein sequence
MTNSLPVRLD DLIGHITTNH PDGDALAQLS DACRIAMVLD EQADHLIGHF VDRARRSGAS 
WSAIGQHMGV SKQAAQKRFV TGPGDFSLGD ADDGKLSRFT GRTKIVLEKG HLTARNLKHS
PVEPIHLLHG LAEEPSTLAA KVLESMGVTI EQLHDRVSEA LDAPGQGAYA TGDIPLSPDS
VETLKLTVRE ALGMGHNYVG TEHLLLGLLA AEGTPAEILG GLGVGHDAAK ERVLAALDAL
MNTKST