Gene Snas_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2154 
Symbol 
ID8883347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2285097 
End bp2285870 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID 
Productcytochrome c biogenesis protein transmembrane region 
Protein accessionYP_003510940 
Protein GI291299662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.69466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.535003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGACT TCCCCTTCGC CCTGGCCCTC GTGGCCGGGG CGCTCGCCGC CGTCAACCCA 
TGCGGGTTCG CACTCCTGCC CGCCTACGCC ACCTTCCTGA TCACCGGAGA CGAGGAACCC
ACCACCCGCC GTTGGTGGAC GACGATCGCC CGAGCCCTGG CACTCACCGC GGCCATGACG
CTGGGATTCG TGCTCGTGTT CGGACTGTTC GGTGTGGCCA TAGCCCCGTT CGCACCCTGG
CTCACCCAGC ACCTGCCATG GCTGACGATC GTCATCGGAC TGCTGCTGGT CGCGGCCGGA
GTCTGGTTGG CCCTCGGCCG CGAGCTGCCG TCCATAGTGC CCAAACTGGG CGGACCGAAG
GTCCGGCGTT CCTTCGTGTC GATGACGGTG TTCGGTGCCG CGTTCGCCAT CGCCTCACTG
GGTTGCACCA TCGCGCCGTT CCTGGCCGTC GTGGTGTCGA CGTTCCGCAC CGAGTCCGTC
GTGGCGGGCG TGGGTCTGTA TCTGGCCTAC GCGCTGGGCA TGGGGCTGGT GATCGGCGTG
GTGTCACTGG CGATCGCGCT GGCCAAGGAC GGGCTGGTGA AGCGGGTGCG CCGGGCGCTT
CCGCTCGTCA GCCGGATCGC CGGGGCGCTG CTGTTGGTCG CGGGTGCCTA TGTCGCCTAT
TACGGGTGGT ATGAGCTGAG AGTGGCCGCA GGTGGTGACA CCGACGACCC GGTTGTCGCG
GCGGCATCGG AGATCCAGGC TTGGTTGACG ATGGTGGTCG AGGCGGTCTT CTGA
 
Protein sequence
MSDFPFALAL VAGALAAVNP CGFALLPAYA TFLITGDEEP TTRRWWTTIA RALALTAAMT 
LGFVLVFGLF GVAIAPFAPW LTQHLPWLTI VIGLLLVAAG VWLALGRELP SIVPKLGGPK
VRRSFVSMTV FGAAFAIASL GCTIAPFLAV VVSTFRTESV VAGVGLYLAY ALGMGLVIGV
VSLAIALAKD GLVKRVRRAL PLVSRIAGAL LLVAGAYVAY YGWYELRVAA GGDTDDPVVA
AASEIQAWLT MVVEAVF