Gene Snas_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2140 
Symbol 
ID8883333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2270211 
End bp2271305 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510927 
Protein GI291299649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.931456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.664029 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGCA CCAGCAGACC ACCCGCGCGG GGCTCCGAGA ACAACGGCAG TGGCGGCAGC 
GACGGTTCGG GGAGCGGTGA GGACAAGGTC AAGGGCCCCA CCGACAAGGA GCTCGAGGAC
GCGGTGAACA AGCTGGTCGA GGTCGCCAAG AAGAAGGCGC AGGAGGAGGC GGACCAGGCC
AGGCGGAGCG TCGAGGGCAA GAAGTCCTTC GAGGGTGACG TGCTCGAGTA CCCGTACACC
CGGGAGGAGG TGACCAAGAT GATCGAGGAC GGCGCCAAGG AGATCAAGGA GCGGTTCGCG
GCGGTCTACA CCCCCAAACC GGACGACTTC GACACCATGA TCAGCAGGAT GCAGCAGGTG
GAGGCCGTCC TGGGCGCCTA CGAGCCGTCC AAGAACACCA CCAAGGAGAC GCCGGTGATC
GGGGGCGGCG GGGATCTGGA ACTGCTGCGA ACCTCCGTCT CGGACATGTC CGACTGGCAG
GGCAAGCTCA AGAACGCCTT CGTCGACAAC TACCTGACGC CGTTCCCGCG CATCACGGTG
ACCCAGGGCG GCCTGGCGCG TTTCCTGCGG CACCAGGCGG AGTGGATGCA GGCGATCTAC
AAGCGCCGCC GCTACGACGC GAAGAAGACC GCCGACCAGG GGGTCGAGGC GATCGAGGCC
ATCGACGACA GCAAGGGCTC CGAGGCCGCG ATCGCGCTGG CGGCGATCAT CGGACTGGCC
ACATTGCTCG GTCCGATGGG TTCGTCGCTG GCGTTCGGGC TGGGTACCTC CGCGGTGGTC
GCCGGGACGG GCATCGGCGC GGAGTTCATC GAGGAGGACA AGGAGGTCCC GCTGGGGGCC
GACACCGTCC AGGGCGTCAT CGACAACGTG TACAAGGCCC TGGAGGAGTC GGACAAGACC
ATGGTGGAGG AGGAGGGCAA GGTCCTCGAC GCGCTGAAGC AGATCGAGGG CGTGGTCTAC
CCGCTGGTCA TGGGGCCCGA CATCGACAAG GGCACCGAGC TGACCCCCAT GCGTCCCGCT
ATTGTGGACA CAATGGATGT CGAGGAACTC AAGGACGGCA TCACCGTGTA CGACCGTCAT
CCCGGCGGCA GCTAG
 
Protein sequence
MTSTSRPPAR GSENNGSGGS DGSGSGEDKV KGPTDKELED AVNKLVEVAK KKAQEEADQA 
RRSVEGKKSF EGDVLEYPYT REEVTKMIED GAKEIKERFA AVYTPKPDDF DTMISRMQQV
EAVLGAYEPS KNTTKETPVI GGGGDLELLR TSVSDMSDWQ GKLKNAFVDN YLTPFPRITV
TQGGLARFLR HQAEWMQAIY KRRRYDAKKT ADQGVEAIEA IDDSKGSEAA IALAAIIGLA
TLLGPMGSSL AFGLGTSAVV AGTGIGAEFI EEDKEVPLGA DTVQGVIDNV YKALEESDKT
MVEEEGKVLD ALKQIEGVVY PLVMGPDIDK GTELTPMRPA IVDTMDVEEL KDGITVYDRH
PGGS