Gene Snas_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2109 
Symbol 
ID8883302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2235338 
End bp2235952 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510896 
Protein GI291299618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.331867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAGG ACGAGAAACC GGCTGTGTCG GCGAAATCGC GGGACGAGAA GGCCACCGCC 
TCCCGGCAGG AGCGGCGCCG GGCCGCGCGG ATCGCGACGT TGGTGGCGAT TCCGGTCACG
CTGGTGGCGT TGTTCGGAGC GATCTCGTTC ATGGGATCGA TGGCCGGGGC CGAGGAGGAG
TCGTCCGATG TGCCCGACGA GGCCGTCGAG GTCGCCGCGC CGGATCTGTC CGATGAGGAT
TTCAAGTACT GCCGGGCGCT GATCACGAAG CTGCCCGATC CCTTGGGGGA CCTCAAACGC
CGGGTGGTGT CGGGTGACAA CGGAGCGCCG GAGATCGCCG GGGCCTGGGG CGATCCGGCC
GCGAAGCTGC GCTGTGGCGT CGAGCCGGTG AAGGTGGCGA AGGACGCGAA GGTGTACCGG
CTGGGCCCGA CCTGCTGGTT CGCGGACAAG TCGAAGAAGA CCACCACCTG GACCACGGTG
GATCGCGAGC TGGCGGTGGA ACTGACGGTT CCGAACAAGT ACGAGCAGCC GGGGCAGCTG
GCGCAGGCGC TGTCGAAGCC GGTGGACAAG AAGATCCCGG CGTCCAAGGA CGCTCCCACG
GGGTGCAGCT CTTAG
 
Protein sequence
MAEDEKPAVS AKSRDEKATA SRQERRRAAR IATLVAIPVT LVALFGAISF MGSMAGAEEE 
SSDVPDEAVE VAAPDLSDED FKYCRALITK LPDPLGDLKR RVVSGDNGAP EIAGAWGDPA
AKLRCGVEPV KVAKDAKVYR LGPTCWFADK SKKTTTWTTV DRELAVELTV PNKYEQPGQL
AQALSKPVDK KIPASKDAPT GCSS