Gene Snas_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2106 
Symbol 
ID8883299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2231660 
End bp2232568 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510893 
Protein GI291299615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.844619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGAA GTCTAGTGAC GGTCGCCGTG GCCGTGTCCC TGCTGGCCGG CTGCACCTCG 
GCCGGTTCCC CCGACACCGA ATCAGCGTCG AAATCGAAGA ACGACGAGCC CACCACCTGG
GTCTACCAGC TGGAGGGCTA CCCCGACGGC ACCCTCGACG AGATCGTCAA GGCGCCCCAC
GAGGCGGCCG TCATCGACCT GGCCCGCGAC GGCGGCGACG ACTACTTCTC CAAGAAGGAG
ATCACCGAGG TCAAGGACTC CGGTAAGACG ACGCTGTCGT ACTTCTCGAT GGGCTCGATC
GAGAAGTACC GCCCCGAGTA CGACGACATT GCCGCAAGCG ACCTGATGCT CAACCGCTGG
GACGACTGGC CCGACGAGAA CTTCGTCAAG TACTGGGAGG ACGAGTGGTG GGACAAGGTG
GTGCGTCCGC GTCTCGACCT GTCGATGGAG GCCGGGTTCG ACGGCGCCTA CCTCGACGTC
CCCAACGCGT ACGAGGACAT CGACCTCGAC CTGGTTCCCG GCGAGACCCG CGAAAGCCTG
GGCCGCAAGA TGACCGACCT GATCATCAAG ATCAGCGAGT ACACCAAGAA GCGCGAACCC
GACTTCATGG TGCTGCCGCA GAACTCCCCG GAACTGCGCG AGTTCGACGG TTACATGGAC
GCGATCGACG GCCTGGGCGT CGAGGACCTG TTCTTCCTCG ACTCCGACAA GCCCTGCACC
GAGGAATGGT GCGAGGAGAA CCTGAACAAC GTGCGCGCGA TCCGCGAGGC CGGGAAGCTC
GTCCTGTCGG TCGACTACGC CAGCGAGGAA TCCAATATCG AGAAAGCCTG CGAACACTAC
GCCGAGGAGG ACTTCGCCGG GTACGTCAGT GTCGTGGAAC TGGACCGGAT CAAGCCTCCC
TGCCCGTAA
 
Protein sequence
MRGSLVTVAV AVSLLAGCTS AGSPDTESAS KSKNDEPTTW VYQLEGYPDG TLDEIVKAPH 
EAAVIDLARD GGDDYFSKKE ITEVKDSGKT TLSYFSMGSI EKYRPEYDDI AASDLMLNRW
DDWPDENFVK YWEDEWWDKV VRPRLDLSME AGFDGAYLDV PNAYEDIDLD LVPGETRESL
GRKMTDLIIK ISEYTKKREP DFMVLPQNSP ELREFDGYMD AIDGLGVEDL FFLDSDKPCT
EEWCEENLNN VRAIREAGKL VLSVDYASEE SNIEKACEHY AEEDFAGYVS VVELDRIKPP
CP