Gene Snas_2095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2095 
Symbol 
ID8883288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2221208 
End bp2221978 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003510882 
Protein GI291299604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGA TCGTGAGAGC TCTTCCCGCC TTCTCCGCCG ACGCTTCGGG CCAGCCGGGC 
GTGGCGCGAC GTGGTGACGG CAGCCCGGCC CGGCTGCTGG TCGTCGAGGA CGAATCGCTG
TTGGCCGACA TGCTGCTGGA CGCGCTGTCG TTCGCCGGGT ACGAGGTTCA CGTGTGCCGC
AGCGGGGTGC AGGCCATGGC CGCGGTCGAG GAGCGGCGGC CCGACATCGT GCTGCTGGAC
GTGAACATGC CCGATTTCGA TGGGTTCACC GTCGCGGCGA GGCTGCGGGC GGCTTCGGAT
CTGACGCCGA TCATCTTCCT GACCGCCCGC GACACCGCGC AGGACCTGCG GCGCGGGTAC
CTGTCCGGGG GCGACGACTA CCTCACCAAA CCGTTCCGGT TGGAGGAGCT GCGGCTGCGC
ATCGAGGCGG TGTTGCGGCG CACTTTGGAC GGTCGTGATG CCGAGACGAC GCGGTTCGAG
GTCGGCGATC TGGTGCTGGA GACCCGGGCG CACCAGGTGT GGCGGGCGGG CGAGGAGATC
GAGTTGTCGG CCACAGAGTT TCGGCTGCTG ACGCAGTTGA TCCGCAACGT CGACAAGGTG
CTGTCCCGCG CGGACCTGCT GCGGCAGGTG TGGGGCATGG AATTCGACAG CGACACGTCC
CTTGTAGAGA CTTATATCTC GTACCTGCGC CGGAAGCTGG ACAACCGGGA ACCGCGGCTG
ATCCGCACGG TGCGCGGAGT CGGGTACGTG TTGCGACGAC CTAGGGAGTG A
 
Protein sequence
MLEIVRALPA FSADASGQPG VARRGDGSPA RLLVVEDESL LADMLLDALS FAGYEVHVCR 
SGVQAMAAVE ERRPDIVLLD VNMPDFDGFT VAARLRAASD LTPIIFLTAR DTAQDLRRGY
LSGGDDYLTK PFRLEELRLR IEAVLRRTLD GRDAETTRFE VGDLVLETRA HQVWRAGEEI
ELSATEFRLL TQLIRNVDKV LSRADLLRQV WGMEFDSDTS LVETYISYLR RKLDNREPRL
IRTVRGVGYV LRRPRE