Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2084 |
Symbol | |
ID | 8883277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2212687 |
End bp | 2213559 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | RNA polymerase sigma-24 subunit, ECF subfamily |
Protein accession | YP_003510871 |
Protein GI | 291299593 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCA CCGGCTCGCT GGCGGAGGCC GACTGGGAGT CGCATCGCTC GGCGGTCTTC GGGGCCGCCT ACCGCATCCT CGGCACGGTG ACCGATGCCG AGGACGTGAC CCAGGAGGTG TGGCTGCGCG CCGACACCAG CGATCTGTCC GGGGTACGGG ACCTGCGAGC CTGGCTCGTG ACCGTTGCCG CCCGGACGTC GTACAACCTG CTGAAGTCGG CGCGCGTCCG ACGGGAGTCC TATGTGGGCC CCTGGCTGCC TGAGCCGCTG CTGACCGGAC CCGACGCCGC CGACCGGGTA CTCCTGGACG AGTCGGTGAG CACCGCGATG CTGGTGGTCA TGGAGAAGCT GTCGCCCGCC GAACGGGTCG CGCTGGTACT GCACGACGTC TTCGACTTCC CGTTCGGACG AATCGCCGAG GTGCTCGGCG GCACGCCCGC CGCCAGCCGC AAGCTCGCCT CCCGCGCCCG GGCCCGGGTC GCCGAGGCCA AGGAACGGCC CCGGGCGTCC AAGGCCGAGA CCGAACGCGT CCTGCGCGCC TTCAAGGCCG CCACCGACGC CGGTGACCTG ACCGCCCTGG TCACACTGCT CGACCCCGAC GCGGTCTATG TCGGCGACGG CGGCGACAAG GTCCGCGCCG CGCGCAGGCC GGTCGTGGGC GCCGAGGCGA TCGCCCGGTT GACGATCCGC GTGGCCGGAA TGATGCGCCC CGACGCGTTC CGGATCATCG AGGTCAACGG TCAGCCCGCC CTGGCCAGCT ACCGGGACGA CAGGCTGGTC TGGGTCGACA CCGTCGAGAC CTCCGACGGC CGCATCACCG CGTTCCGCCG ACTCGCCAAT CCTGAGAAGT TCGCGCATAT CGGTCACAAC TGA
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Protein sequence | MTLTGSLAEA DWESHRSAVF GAAYRILGTV TDAEDVTQEV WLRADTSDLS GVRDLRAWLV TVAARTSYNL LKSARVRRES YVGPWLPEPL LTGPDAADRV LLDESVSTAM LVVMEKLSPA ERVALVLHDV FDFPFGRIAE VLGGTPAASR KLASRARARV AEAKERPRAS KAETERVLRA FKAATDAGDL TALVTLLDPD AVYVGDGGDK VRAARRPVVG AEAIARLTIR VAGMMRPDAF RIIEVNGQPA LASYRDDRLV WVDTVETSDG RITAFRRLAN PEKFAHIGHN
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