Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2079 |
Symbol | |
ID | 8883272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2205985 |
End bp | 2207496 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | serine/threonine protein kinase |
Protein accession | YP_003510866 |
Protein GI | 291299588 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.161295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.708532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAACA TCAGGATCCT GGGTAACCGG TACCGGCTGG ACGAACGGGT CGACGGCGGC GGCATGGGGG ACGTGTGGCG GGGCCGCGAC ATCCGGCTGG ACCGGACGGT GGCCATCAAG GTGCTGCACG CCGGGCTGTC CGGCGACCCC GCGTTCCGGG AACGGTTCCA CGGCGAGGCC CGCGCGGTGG CGGCGCTGAG CGCCCCGGGC GTGGTCAACC TCTTCGACTA CGGCGAGGAC GCCTCGGCCG ACGCCGGAGT GGTGTCGTAC CTGGTGATGG AGTACGTGCC GGGCCGTTCG CTGCGCACCG TGCTGTCCGA GCGCGGCAGC CTGCGCGTCG ACGAGGTGCT CGACATCGTG GCGCAGTCCG CCGAGGCCCT GGACGTCGCG CACGAGGCCG GGATCATCCA CCGCGACATC AAACCCGGCA ACATCCTCAT CGACGCCGAG ACCGGCGTGG TCAAGATCGT CGACTTCGGC ATCGCCCGCA CCCGGGGCCA GTCCTCGCTC ACCGAGACCG GCGTGGTGAT GGGCAGCGTG TGTTACGTGT CCCCCGAACA GCTCTACGGA CACGAGCCCT CCGGATCGTC CGATGTGTAC TCACTGGGGG TGGTGGCCTA CGAGGCGCTG ACCGGACGCA AGCCCTTCGC CAGCGACGTC CCCGCCACCG TCATCCACGA GCAGATCCAC AAGGCCCCGC CGCCGCTGCC CGAGACCGTT CCGGCCGGGG TGCGCGAGGC GATCATGCGG GCGCTGGCCA AGGAACCGCG GCACCGCTGG CCGAACGCCG CCGCCTTCGC CGCCGCGTGC CGGGAACTCA TCGGCGCCGC CGCGCCCCGC GAGGACGCCA CCGTGCGCGT CGCGGCCGAC GCGGTGCCCA CCACGGTCAT CCCGACGCCC CAGCCGACGA CGGTGCGCGC CGCCGCCGGT CCCCGCCCCG TGACCCCCAC GTCGGGCGCC CGCCGCAACC GCGGCGCGGT GGTCTCGCAC CGCCGCTCCG GGTTGCGGCC CCGCACCCTC GTCGTCACCA CGGCGATCGT GGCGCTGCTG GCGGCCGGGG GCATCGCGGC GGCCCGGCCC TGGGACGACG AGCGCAAGCG CCCGGCCGAG GGCAAGGGTT CGACCGTCGC CGACGACCGC GACGAGACCA CCGCCGCTAC CACCGACTCC GACAAGGCGC CGTCGCCCTC GGAGGAGCAG CCGAGTTCGC AGTCCAGCTC GCACTCGCCG TCCGAGACCC CCTCGACGTC CTCGCCCAGC GAGAAACCCG AGGAGGGCAA GGTGCCCAGC CTGATGGGCC TGAGCGAGGA CGAGGCGTAC GCCAAGGCCG AGGCCAAGGG CTTCACGAAC GTGGCCGCCT ACGAGGTCGG ATCCGGCGAG TACGCGTGCA CCGTCGTGGA GCAGAACCCG AGCGCGGGCT CCAGCCAGGA GCTGGACGAG GAGCTCAGCT TCGGCGTCGA ATACGGCGAC ACCCCCGACT GCGAGACCGA CTCGTCGCCG GAGCCCGAAT AA
|
Protein sequence | MDNIRILGNR YRLDERVDGG GMGDVWRGRD IRLDRTVAIK VLHAGLSGDP AFRERFHGEA RAVAALSAPG VVNLFDYGED ASADAGVVSY LVMEYVPGRS LRTVLSERGS LRVDEVLDIV AQSAEALDVA HEAGIIHRDI KPGNILIDAE TGVVKIVDFG IARTRGQSSL TETGVVMGSV CYVSPEQLYG HEPSGSSDVY SLGVVAYEAL TGRKPFASDV PATVIHEQIH KAPPPLPETV PAGVREAIMR ALAKEPRHRW PNAAAFAAAC RELIGAAAPR EDATVRVAAD AVPTTVIPTP QPTTVRAAAG PRPVTPTSGA RRNRGAVVSH RRSGLRPRTL VVTTAIVALL AAGGIAAARP WDDERKRPAE GKGSTVADDR DETTAATTDS DKAPSPSEEQ PSSQSSSHSP SETPSTSSPS EKPEEGKVPS LMGLSEDEAY AKAEAKGFTN VAAYEVGSGE YACTVVEQNP SAGSSQELDE ELSFGVEYGD TPDCETDSSP EPE
|
| |