| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2074 |
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| Symbol | |
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| ID | 8883267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 2195369 |
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| End bp | 2199325 |
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| Gene Length | 3957 bp |
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| Protein Length | 1318 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003510861 |
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| Protein GI | 291299583 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.717969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAC GACTGGGCCA AGCCGCCCGG GGCCGCGTAT TCTGGCGCCT CGGTATGGCT
ACTGCGGCGA ACATTTCGGT CTCCAGCCTG CGCACCAGGG TGCGTGGGCT GCTGTTGCGT
GACCAGGGGC GGTTCCTGCG CCGGCTCGAC TCGGTCAAGA AGAGCCCCGA CCAGAGTTCG
CTACTGGCGA AAATCGCCGC CGAGCTGGAC GCCGCCGAGA CCCGGGTGGA GCAGCGCCGC
GCCAAGCTGC CGCGCATCGG CTACCCGGCC GAGCTGCCGG TCTCGCAGAA GAAGGACGAC
ATCGCCGCCG CGATCCGCGA CCACCAGGTC GTGATCGTCG CCGGTGAGAC CGGTTCGGGC
AAGACCACCC AGCTGCCGAA GATCTGCCTG GAGCTGGGGC GCGGCGTCCA GGGCATGATC
GGGCACACGC AGCCGCGCCG CATCGCCGCC CGCACCGTGG CCGAGCGGAT CGCCGAGGAG
CTGGACTCGC CGCTGGGGGA GGCGGTGGGC TGGAAGATCC GCTTCACCGA CAAGGTCGGT
GAGAACACCT TCGTCAAGGT GATGACCGAC GGGATCCTGC TGGCCGAGAT CCAGCACGAC
CGGTTCCTGC GCCGCTACGA CACCCTCATC ATCGACGAGG CACACGAGCG CAGCCTCAAC
ATCGACTTCC TGCTGGGCTA TCTCAAACAG CTGCTGCCCC GGCGCCCCGA CCTGAAGGTC
ATCATCACCT CGGCGACCAT CGACCCCGAG CGGTTCTCGA AGCATTTCGG GGACGCGCCG
ATCGTGGAGG TCTCGGGCCG CACCTACCCC GTCGAGGTCC GGTACCGGCC CCTTGTGGAC
GACACCGACG AGGAGGCCGA CGACGTCCGC GACCAGATCG AGGCCATCGT GGACGCCTCC
CGAGAACTGA TGGCCGAGGG CCCCGGCGAC ATCCTGGTGT TCCTGTCCGG GGAACGCGAG
ATCCGCGACA CCGCCGAGGC GCTGTCCAAG GAGAAGTTCC GGCACACCGA GATCCTGCCG
CTGTACGCGC GGCTGTCCTC GGCCGAGCAG CACCGGGTGT TCCAGCGACA CACCGGACGC
CGCATCGTGT TGGCCACCAA CGTCGCCGAG ACCTCGCTGA CCGTCCCGGG CATCAAGTAC
GTCATCGATC CCGGCACCGC CCGCATCTCG CGGTACTCGC ACCGCACCAA GGTGCAGCGG
CTGCCGATCG AACCGATCTC GCAGGCCAGC GCCAACCAGC GCAAGGGCCG CTGCGGTCGC
ACCAGCGACG GCGTCTGCAT CCGGCTGTAC TCCGAAGCGG ACTTCGAGGC CCGGCCGGAG
TTCACCGACG CCGAGATCCT GCGCACCAAC CTGGCCTCGG TGATCCTCCA GATGACCGCC
GCCGGGCTGG GCAAGATCGA GGAGTTCCCG TTCATCGACC CGCCCGACCG CCGCAACATC
CGCGACGGCG TGCTGCTGCT GACCGAACTG GGCGCCATCG ACGACACCGT TTCGGATCCG
CGTAAGCGGC TCACCAAACG CGGCCGCCAG CTGTCGCAGT TGCCGGTGGA CCCCCGGCTG
GGCCGGATGG TGTTGCAGGC GCACCAGGAC GGCTGCCTGC ACGAGGTCAT GGTCATCGCC
GCCGGTCTGT CGATTCAGGA CCCGCGTGAG CGTCCGGCCG ACAACCAGCA GGCCGCCGAC
GCCAAGCACT CCCGCTTCGC CGATCCGACC TCGGACTTCC TGGCCTACCT CAATCTCTGG
AACTACCTCA AGGACGAACA GAAAGCGCGC TCATCGAGCG CGTTTCGTCG TATGTGCAAG
TCCGAGTTCC TGCACTTCAT GCGGATCCGG GAATGGCAGG ACATCTACGG GCAGCTGCGG
CAGACGCTGA AGAACCTCGG CCTGACGATG AACGCCGCGA CCAACGAGGT CGACCCGCAG
CGGGTGCACG TCGCGCTGCT GTCGGGGCTG CTGTCCCACA TCGGACTCAA GGACCCCGAG
ACCCGCGACT ACCTGGGCGC CAGGGGCGCG CGGTTCTCGA TCTTCCCCGG CTCGTACCTG
TTCAAGAAGC AGCCCAAGTG GATCATGAGC GCCGAGCTCG TCGAGACCTC CAAGCTGTGG
GCCCGGGTCA ACGGCAAGAT CGAACCCGAG TGGATCGAAC CGCTGGCCGG CCACCTCGTC
AAACGCGACT ACTCCGAACC CCACTGGGAG AAGAAGGCCG CCGCGGTCAT GGCCATGGAG
AAGGTGACCC TGTACGGCGT GCCGATCGTG ACCGCCCGCA AGGTCAACTT CGGACGCATC
GACCCGGAGA TCTCCCGGGA ACTGTTCATC CGGGGCGCGC TGGTCGAGGG CGACTGGGAC
ACCCACCACA AGTTCTTCGC CGCCAACCGG GCGCTTTTGG ACAGTGTTGA GGACCTGGAG
AACCGGGCCC GGCGGCGCGA CATCCTCGTC GACGAGGAGA CCCTGTTCGA CTTCTACGAC
CGCCGTATCC CCGCCGACGT GGTGTCGGGC AGGCATTTCG ACAGCTGGTG GAAGAAGACC
CGCCGTGAGC AGCCCGACCT GCTCGACTTC GAAGAGTCGA TGCTCATCAA CGACGAGGCC
GAGGCCGTCA ACGTCGTCGA CTACCCCGAC GTCTGGGACA CCGAGGGCGT CAGCCTCCCG
CTGACCTACC AGTTCGAGCC GGGCACCGCC GCCGACGGCC TCACCGTCCA CATTCCGCTG
CCGGTACTGG GCCGCCTGGA CCCGGACGTG TTCACCTGGC AGGTTCCGGG ACTGCGCGAG
GAACTGGCCA CCGCGCTGAT CAAGTCGCTG CCCAAGGCGC TGCGCCGTCA TTTCTCGCCC
GCCCCCGACC ACGCCCGCGC GGCCCTGCAC ACCATGACCC CCGAGGGCGG CGGCACCTTC
ACCGAGGCGC TGGCGGTTCA GTTGCACGCC ATGCGAACCG TGACCATCCC CAACCACGCG
TGGGACTACT CGCGGGTGCC CGGTTACCTG CTGCCGACCT TCCGCGTCAC CGACGACGAC
GGCAAGAAGC TGGCCGAGGG CAAGGACCTG CCCGCGCTGC GCAAGAGCCT GGAACCCAAG
GCCAAGGAGG TGCTCGCCGA GTCGGTGCCC GGCATCGAAC GGTCCGGCAT CACGTCCTGG
GACTTCGGCG AGTTGCCCCG GGTGCAGGAA CAGCAGCGGC GCGGCTACGC CGTCAAGGCC
TTCCCCGCCC TTGTGGACGA AGGCAAGAGT GTCGCGATCC GCTTGCACGA CAGCGAGGGC
GCGCAGCAGC TGGCCATGTG GCACGGCACC CGGCGACTGC TGCGGCTGAC CATCGCCTCG
CCGATGAAAC GGGTGCTGGC GGGACTGTCC AGTCAGACGA AACTCGCGTT GAGTGCCAAC
CCGTACGCCG ATGTCCCGGC GCTGCTGGAC GACTGCGTCA ACACCTGTGT GGACAAGCTC
ATGATCGACG CGGGTGGCCC GGTGTGGGAC GAGGCCGCGT TCGAGGGCCT TCGCGACGCG
GTGCGCGCCG AGCTGGCCGA CACGACGATC GCCGCCGTCA CGACGGTCGC GAAGATCCTC
ACCACGGCCC GACGGGTCGA CAAGCTGCTG TCGGGCAACT TCGCCTTCGC TCACCTGGCC
TCGCTGTCCG ACATGAAGCG GCAGCGCGAA GCGTTGGTGT TCAAGGGTTT CGTCAGTGCC
TCGGGCTGGT GGCGGCTGGA CGACCTGGTC CGCTACCTGG AGGGCATCGA ACGGCGGGTC
CAGAAGCTGC CGAAGAACGG CGACGCGGAC GCGGCGTGGA TGACCAAGGC GCAGGCGGTG
GAGGCGGCGT ATCACGAGCT CGTCGCGAGC CTGCCCGCCG CCGCGGCCTC GCCGCAGGGG
CAGGAGGTGC GGTGGATGTG CGAAGAGCTG CGGGTCAGCT ATTTCGCGCA GGAACTGGGA
ACCCGGTACC CGGTCAGCGA CAAACGGGTC CTGAAGGCCA TCAACACGTT GCGCTGA
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| Protein sequence | MRKRLGQAAR GRVFWRLGMA TAANISVSSL RTRVRGLLLR DQGRFLRRLD SVKKSPDQSS
LLAKIAAELD AAETRVEQRR AKLPRIGYPA ELPVSQKKDD IAAAIRDHQV VIVAGETGSG
KTTQLPKICL ELGRGVQGMI GHTQPRRIAA RTVAERIAEE LDSPLGEAVG WKIRFTDKVG
ENTFVKVMTD GILLAEIQHD RFLRRYDTLI IDEAHERSLN IDFLLGYLKQ LLPRRPDLKV
IITSATIDPE RFSKHFGDAP IVEVSGRTYP VEVRYRPLVD DTDEEADDVR DQIEAIVDAS
RELMAEGPGD ILVFLSGERE IRDTAEALSK EKFRHTEILP LYARLSSAEQ HRVFQRHTGR
RIVLATNVAE TSLTVPGIKY VIDPGTARIS RYSHRTKVQR LPIEPISQAS ANQRKGRCGR
TSDGVCIRLY SEADFEARPE FTDAEILRTN LASVILQMTA AGLGKIEEFP FIDPPDRRNI
RDGVLLLTEL GAIDDTVSDP RKRLTKRGRQ LSQLPVDPRL GRMVLQAHQD GCLHEVMVIA
AGLSIQDPRE RPADNQQAAD AKHSRFADPT SDFLAYLNLW NYLKDEQKAR SSSAFRRMCK
SEFLHFMRIR EWQDIYGQLR QTLKNLGLTM NAATNEVDPQ RVHVALLSGL LSHIGLKDPE
TRDYLGARGA RFSIFPGSYL FKKQPKWIMS AELVETSKLW ARVNGKIEPE WIEPLAGHLV
KRDYSEPHWE KKAAAVMAME KVTLYGVPIV TARKVNFGRI DPEISRELFI RGALVEGDWD
THHKFFAANR ALLDSVEDLE NRARRRDILV DEETLFDFYD RRIPADVVSG RHFDSWWKKT
RREQPDLLDF EESMLINDEA EAVNVVDYPD VWDTEGVSLP LTYQFEPGTA ADGLTVHIPL
PVLGRLDPDV FTWQVPGLRE ELATALIKSL PKALRRHFSP APDHARAALH TMTPEGGGTF
TEALAVQLHA MRTVTIPNHA WDYSRVPGYL LPTFRVTDDD GKKLAEGKDL PALRKSLEPK
AKEVLAESVP GIERSGITSW DFGELPRVQE QQRRGYAVKA FPALVDEGKS VAIRLHDSEG
AQQLAMWHGT RRLLRLTIAS PMKRVLAGLS SQTKLALSAN PYADVPALLD DCVNTCVDKL
MIDAGGPVWD EAAFEGLRDA VRAELADTTI AAVTTVAKIL TTARRVDKLL SGNFAFAHLA
SLSDMKRQRE ALVFKGFVSA SGWWRLDDLV RYLEGIERRV QKLPKNGDAD AAWMTKAQAV
EAAYHELVAS LPAAAASPQG QEVRWMCEEL RVSYFAQELG TRYPVSDKRV LKAINTLR
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