Gene Snas_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2054 
Symbol 
ID8883247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2174558 
End bp2175118 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003510841 
Protein GI291299563 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.388224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAGG GTCCGCGACC GCTCATCGAA GTCATCGCCC ACGCGCTGCG CCGCGAACGC 
GACCGGGCCG GACTGTCACT CAGTGAGGTG GCCAAACGCG CCGGAATCGC CAAATCCACG
CTGTCCCAGC TGGAAGCCGG TTCCGGAAAT CCCGGCGTCG AGACACTGTG GGCACTCAGC
GTCGCCCTGA ACGTGCCGTT CGCCACCCTG GTCGAACCCT CCACGTCCCG GGTCCAGGTG
ATCCGCGCCG GACAGGGCCC CACCTTCGCC GCCGAACACG CCGACTACGT CGCCACCGTC
CTGTCGGCCT CCCCGCCCCG GGCCCGCCGT GACCTGTACC TGGTCACCGG ACAGCCCGGC
AAGGCCCGCG ACTCCGAGCC GCACATGTAC GGGGTCGTCG AGCACGTCAT CGTGTGCGCC
GGACGCGCCC TCGTCGGCCC GATCGACGAA CCGGTCGAGC TCACACCGGG GGACTACATC
TCCTACCCCG GCGACGCCGC CCACACGTTC AAGGCCCTGG AACCCGACAC CTTCGCGGTG
CTGGTCTCAG AACACAATTA G
 
Protein sequence
MGEGPRPLIE VIAHALRRER DRAGLSLSEV AKRAGIAKST LSQLEAGSGN PGVETLWALS 
VALNVPFATL VEPSTSRVQV IRAGQGPTFA AEHADYVATV LSASPPRARR DLYLVTGQPG
KARDSEPHMY GVVEHVIVCA GRALVGPIDE PVELTPGDYI SYPGDAAHTF KALEPDTFAV
LVSEHN