Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2038 |
Symbol | |
ID | 8883231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2160948 |
End bp | 2163104 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | MMPL domain-containing protein |
Protein accession | YP_003510826 |
Protein GI | 291299548 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.274415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACAA CACTGCCTCC ACCCACCGAG TTGCCCGCCG CCCGGCAGGG GATGTTGGTG CGCTTGACCG ACTGGTCCGC GCGCCACCGC GTCCTGTCCG TGCTGATCTG GGTGGCGCTG CTCGCGGGAG TCACCTTCGC GGCCGGGCGC GTCGGTTCCG ACTACCACGA CGACCATTCG CTGCCGGGCA CCGAATCCCA GGAGATCGCC GATCTGTTGG AGGAGCGGGT GCCCAAGGAA TCCGGGGACA CGCTTCAGAT CGTGTTGTCG GGTTCCAAGG CCGACATCGC CGACGCTCGT GCCGACGTCG AGTCCATGTT GGATGACGTG CGCGATCTCG ATCATGTCGA CGAGGTCGAC GACCCGTTCA AGGCCGAGCA CAACTGGTCC GAGGACGGGA CCGTCGGCTT CGCCACCGTC ACCCTGGACG GTAAGTCAGC CGACATCCCC GACGCGGACG TGCGCGACAT CATCGATACC GCCAAGGAAG CCGAGACCGA CGAGCTGCGG GTCGAGCTGG GTGGTGACCC GATCCGGGGG GCTGAGGAGA GCGCCGGTGG GGCCGCCGAG GGGGCCGGGA TGCTTGCCGC ACTGGTGATC CTGGTGTTCA TGTTCGGGTC GCTGCTGGCC GCCGCTGTTC CATTGGGGAC CGCGATCTTC GCGGTCGGGT CTACCTTGGG TGTCATCGCG TTGGCCTCGC AGGTGTTCAC GTTGCCCAGT TACCTGCCGC CGTTGATGAT GCTGGTCGGG TTGGGGGTCG GTGTCGACTA CGCGCTGCTG ATCTTCAGCC GCTACCGGTC CGAGATCCTC GCCGGGGCCG ATCGGGCCAC CGCCGCTCGG ATTGCCGCTG ATACCGCTGG GCGGTCGGTC TTGTTCGCGG GCTGCACCGT GATCGTGGCG CTGTTGGGCC TGTACGCGTT GGGCTTGGGA TCGTTGCAGG GCGTCGCGTT GGGGGTCGCC TTGACCGTCG CGGTCACCAT GTTGGCGTCC ATCACGCTGT TGCCCGCGCT GCTGACCATG TTCGGTCGGC GGATTGCGGC CCGGATCTTG AAGCGCGCCA AACGATCCAA GCGGGAGCCC GGTCACGGGT GGCGGCGCTG GGGGGCGTTC ATGCAGCGGC GTCCCGTGGT GCCGTTGCTG TTGGCTGTGG CGGCGTTGGC CGCGATGTGT GTCCCCGCGC TGGATCTGCG GTTGGGGTTC GCCGACGCGG GCACCGACAC TCCGGGGTCG ACCAGTCGGG CCGCCTATGA CGTCATGACC GACGGGTTCG GCCCGGGCGC CAACGGTCCG ATCCTGGTGC TCGTCGAGGG GAGCCTTGAG GACGCCCAGA CCGCCGCCGA CGCGTTGCGG GACACCGATG GTGTCGAGGA CGCCACCCCG GCCTTCCCCA TTGAGGACGA GCTGGCCATG GTGCAGGTGT TCCCCGACAG CGCGCCGCAG GACGACGCGA CCGGTCGCCT CGTCACCGAA CTGCGTGAGG ACGTGCTGCC GCCGATCGCC GACGACACCG GCGCGACCTA CCTGGTGGGC GGCTCCACCG CCGCGACCGT CGACTTCGCC GACGCGGTGT CGCAGCGGAT GCCGCTGTTC CTGCTGCTGG TCATCGGACT GTCCTCGCTG TTGCTGATGG CGGTGTTCCG GTCGGTGCTG ATCCCGGTCA AGGCCGCGAT CCTGAACCTG CTGAGCATCG GCGCGTCGCT GGGCGTGGTG ACGCTGGTGT ACCAGTACGG CTGGTTCGGC GCCCAGCCCG GCCCGATCGA GGCGTTCGTG CCGACGATGA TCTTCGCGAT CGTGTTCGGG CTGTCCATGG ACTACGAGGT GTTCCTGGTG TCGCGGATGC ACGAGGAGTG GCGCCGCGGC GGCGACGCCG ACCACGCGGT GCGCGAGGGC CTGGCCACCA CCGGCGGCGT CATCACCGCC GCGGCCGCGA TCATGATCGT CGTGTTCGGT GCCTTCGTCC TGTCGGCCGA CCGGATGCTG CAACAGTTCG GGCTGGGCCT GGCGGTGGCC ATCGCCGTGG ACGCCCTGGT GATCCGCTGT CTGGTGGTGC CGACGGTGAT GCGGCTGCTG GGCCCGCGCG CCTGGTGGCT GCCGCGCTGG CTGGACCGGA TCCTGCCGAA GATCCGGCTG GAGAGCGAGG CGACGGTCAG TCGATGA
|
Protein sequence | MTTTLPPPTE LPAARQGMLV RLTDWSARHR VLSVLIWVAL LAGVTFAAGR VGSDYHDDHS LPGTESQEIA DLLEERVPKE SGDTLQIVLS GSKADIADAR ADVESMLDDV RDLDHVDEVD DPFKAEHNWS EDGTVGFATV TLDGKSADIP DADVRDIIDT AKEAETDELR VELGGDPIRG AEESAGGAAE GAGMLAALVI LVFMFGSLLA AAVPLGTAIF AVGSTLGVIA LASQVFTLPS YLPPLMMLVG LGVGVDYALL IFSRYRSEIL AGADRATAAR IAADTAGRSV LFAGCTVIVA LLGLYALGLG SLQGVALGVA LTVAVTMLAS ITLLPALLTM FGRRIAARIL KRAKRSKREP GHGWRRWGAF MQRRPVVPLL LAVAALAAMC VPALDLRLGF ADAGTDTPGS TSRAAYDVMT DGFGPGANGP ILVLVEGSLE DAQTAADALR DTDGVEDATP AFPIEDELAM VQVFPDSAPQ DDATGRLVTE LREDVLPPIA DDTGATYLVG GSTAATVDFA DAVSQRMPLF LLLVIGLSSL LLMAVFRSVL IPVKAAILNL LSIGASLGVV TLVYQYGWFG AQPGPIEAFV PTMIFAIVFG LSMDYEVFLV SRMHEEWRRG GDADHAVREG LATTGGVITA AAAIMIVVFG AFVLSADRML QQFGLGLAVA IAVDALVIRC LVVPTVMRLL GPRAWWLPRW LDRILPKIRL ESEATVSR
|
| |