Gene Snas_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2038 
Symbol 
ID8883231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2160948 
End bp2163104 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMMPL domain-containing protein 
Protein accessionYP_003510826 
Protein GI291299548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.274415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA CACTGCCTCC ACCCACCGAG TTGCCCGCCG CCCGGCAGGG GATGTTGGTG 
CGCTTGACCG ACTGGTCCGC GCGCCACCGC GTCCTGTCCG TGCTGATCTG GGTGGCGCTG
CTCGCGGGAG TCACCTTCGC GGCCGGGCGC GTCGGTTCCG ACTACCACGA CGACCATTCG
CTGCCGGGCA CCGAATCCCA GGAGATCGCC GATCTGTTGG AGGAGCGGGT GCCCAAGGAA
TCCGGGGACA CGCTTCAGAT CGTGTTGTCG GGTTCCAAGG CCGACATCGC CGACGCTCGT
GCCGACGTCG AGTCCATGTT GGATGACGTG CGCGATCTCG ATCATGTCGA CGAGGTCGAC
GACCCGTTCA AGGCCGAGCA CAACTGGTCC GAGGACGGGA CCGTCGGCTT CGCCACCGTC
ACCCTGGACG GTAAGTCAGC CGACATCCCC GACGCGGACG TGCGCGACAT CATCGATACC
GCCAAGGAAG CCGAGACCGA CGAGCTGCGG GTCGAGCTGG GTGGTGACCC GATCCGGGGG
GCTGAGGAGA GCGCCGGTGG GGCCGCCGAG GGGGCCGGGA TGCTTGCCGC ACTGGTGATC
CTGGTGTTCA TGTTCGGGTC GCTGCTGGCC GCCGCTGTTC CATTGGGGAC CGCGATCTTC
GCGGTCGGGT CTACCTTGGG TGTCATCGCG TTGGCCTCGC AGGTGTTCAC GTTGCCCAGT
TACCTGCCGC CGTTGATGAT GCTGGTCGGG TTGGGGGTCG GTGTCGACTA CGCGCTGCTG
ATCTTCAGCC GCTACCGGTC CGAGATCCTC GCCGGGGCCG ATCGGGCCAC CGCCGCTCGG
ATTGCCGCTG ATACCGCTGG GCGGTCGGTC TTGTTCGCGG GCTGCACCGT GATCGTGGCG
CTGTTGGGCC TGTACGCGTT GGGCTTGGGA TCGTTGCAGG GCGTCGCGTT GGGGGTCGCC
TTGACCGTCG CGGTCACCAT GTTGGCGTCC ATCACGCTGT TGCCCGCGCT GCTGACCATG
TTCGGTCGGC GGATTGCGGC CCGGATCTTG AAGCGCGCCA AACGATCCAA GCGGGAGCCC
GGTCACGGGT GGCGGCGCTG GGGGGCGTTC ATGCAGCGGC GTCCCGTGGT GCCGTTGCTG
TTGGCTGTGG CGGCGTTGGC CGCGATGTGT GTCCCCGCGC TGGATCTGCG GTTGGGGTTC
GCCGACGCGG GCACCGACAC TCCGGGGTCG ACCAGTCGGG CCGCCTATGA CGTCATGACC
GACGGGTTCG GCCCGGGCGC CAACGGTCCG ATCCTGGTGC TCGTCGAGGG GAGCCTTGAG
GACGCCCAGA CCGCCGCCGA CGCGTTGCGG GACACCGATG GTGTCGAGGA CGCCACCCCG
GCCTTCCCCA TTGAGGACGA GCTGGCCATG GTGCAGGTGT TCCCCGACAG CGCGCCGCAG
GACGACGCGA CCGGTCGCCT CGTCACCGAA CTGCGTGAGG ACGTGCTGCC GCCGATCGCC
GACGACACCG GCGCGACCTA CCTGGTGGGC GGCTCCACCG CCGCGACCGT CGACTTCGCC
GACGCGGTGT CGCAGCGGAT GCCGCTGTTC CTGCTGCTGG TCATCGGACT GTCCTCGCTG
TTGCTGATGG CGGTGTTCCG GTCGGTGCTG ATCCCGGTCA AGGCCGCGAT CCTGAACCTG
CTGAGCATCG GCGCGTCGCT GGGCGTGGTG ACGCTGGTGT ACCAGTACGG CTGGTTCGGC
GCCCAGCCCG GCCCGATCGA GGCGTTCGTG CCGACGATGA TCTTCGCGAT CGTGTTCGGG
CTGTCCATGG ACTACGAGGT GTTCCTGGTG TCGCGGATGC ACGAGGAGTG GCGCCGCGGC
GGCGACGCCG ACCACGCGGT GCGCGAGGGC CTGGCCACCA CCGGCGGCGT CATCACCGCC
GCGGCCGCGA TCATGATCGT CGTGTTCGGT GCCTTCGTCC TGTCGGCCGA CCGGATGCTG
CAACAGTTCG GGCTGGGCCT GGCGGTGGCC ATCGCCGTGG ACGCCCTGGT GATCCGCTGT
CTGGTGGTGC CGACGGTGAT GCGGCTGCTG GGCCCGCGCG CCTGGTGGCT GCCGCGCTGG
CTGGACCGGA TCCTGCCGAA GATCCGGCTG GAGAGCGAGG CGACGGTCAG TCGATGA
 
Protein sequence
MTTTLPPPTE LPAARQGMLV RLTDWSARHR VLSVLIWVAL LAGVTFAAGR VGSDYHDDHS 
LPGTESQEIA DLLEERVPKE SGDTLQIVLS GSKADIADAR ADVESMLDDV RDLDHVDEVD
DPFKAEHNWS EDGTVGFATV TLDGKSADIP DADVRDIIDT AKEAETDELR VELGGDPIRG
AEESAGGAAE GAGMLAALVI LVFMFGSLLA AAVPLGTAIF AVGSTLGVIA LASQVFTLPS
YLPPLMMLVG LGVGVDYALL IFSRYRSEIL AGADRATAAR IAADTAGRSV LFAGCTVIVA
LLGLYALGLG SLQGVALGVA LTVAVTMLAS ITLLPALLTM FGRRIAARIL KRAKRSKREP
GHGWRRWGAF MQRRPVVPLL LAVAALAAMC VPALDLRLGF ADAGTDTPGS TSRAAYDVMT
DGFGPGANGP ILVLVEGSLE DAQTAADALR DTDGVEDATP AFPIEDELAM VQVFPDSAPQ
DDATGRLVTE LREDVLPPIA DDTGATYLVG GSTAATVDFA DAVSQRMPLF LLLVIGLSSL
LLMAVFRSVL IPVKAAILNL LSIGASLGVV TLVYQYGWFG AQPGPIEAFV PTMIFAIVFG
LSMDYEVFLV SRMHEEWRRG GDADHAVREG LATTGGVITA AAAIMIVVFG AFVLSADRML
QQFGLGLAVA IAVDALVIRC LVVPTVMRLL GPRAWWLPRW LDRILPKIRL ESEATVSR