Gene Snas_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2025 
Symbol 
ID8883218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2146009 
End bp2146848 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID 
Productphenazine biosynthesis protein PhzF family 
Protein accessionYP_003510813 
Protein GI291299535 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.98196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0235141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCT ACGAGATCGT CGACGTGTTC ACCGACCGCG CCTTCGCGGG CAATCCGCTG 
GCGGTGGTGT TCGGCGCCGA GACGCTGACC GACGCGGGGA TGCAGGCGAT CGCCGCCGAG
TTCAACCTGT CCGAGACCGC GTTCGTGCTG CCGACCACTC AGGACGGTGC CACCTACCGG
GTGCGGATCT TCACCCCGCT GCGGGAACTG CCCTACGCCG GGCACCCCAG CGTCGGCACG
GCCGTGACGC TGGCCCGGCG CGGCGACATC GGCCACGGAG CGGCCATACA GGAGTGCGGC
GTCGGGTTGC TGCCCATCAC GGTGATGGAA GACGAGGCGA CCCTGACCGG CGGCGAGCCC
AGCTGCGGCG GGCCGGTGGA CACCGCCGCG CTGCTGGCGG CGGCCGGGCT GGCCGACTCC
GACCTGACCG GCCCGGCCCG CTTCGCGGGC ACCGGACTGG AGTTCCCGTA CCTGCCGGTC
ACGGACGAGG CGGTGACGCG GGCGGTGTCC CATCCGCGCG AGGACGTGCC GGAGGTGTGC
CTGTTCGCGT TCGACGCGGC GACCCGCGTC TCGCACTCGC GGCTGTTCGC GCCGGGACAC
GGGGTCGCCG AGGACCCGGC TACCGGCTCG GCCGCGCTGG GACTGGGCGT CTACCTGGTC
GCCGAGGGCC TCATGCCCGA CGACGGCACG CACTCCTATG TGGTCGAACA AGGCGCGGAG
CGAGGACGTC CGTCCCGGTT GCACTGTGAG GTGACCGCGA AGGACGGTGC CGCGACCGAG
GTGCGGGTGC GCGGTCGGGT CGTACCGGTG GCGCGGGGCG AGTTCGTCGC CCTGCCCTGA
 
Protein sequence
MISYEIVDVF TDRAFAGNPL AVVFGAETLT DAGMQAIAAE FNLSETAFVL PTTQDGATYR 
VRIFTPLREL PYAGHPSVGT AVTLARRGDI GHGAAIQECG VGLLPITVME DEATLTGGEP
SCGGPVDTAA LLAAAGLADS DLTGPARFAG TGLEFPYLPV TDEAVTRAVS HPREDVPEVC
LFAFDAATRV SHSRLFAPGH GVAEDPATGS AALGLGVYLV AEGLMPDDGT HSYVVEQGAE
RGRPSRLHCE VTAKDGAATE VRVRGRVVPV ARGEFVALP