Gene Snas_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2021 
Symbol 
ID8883214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2143272 
End bp2143904 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510809 
Protein GI291299531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0587902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTT CGAAAGACGT CGTCCGCGGA CTCATCGAAC GCCACGGAAC GACCTACGCC 
GAACAGGCCG GGATCAACCT GCGCGACACC CCGGCCCCGC TCTACCAACT GCTGATGCTG
TCCACACTCC TGTCGGCCCG CATCGGCTCC GACATCGCGG TGGCCGCCGC GAAGGAACTG
TTCACCAGCG GCTACCGCAC CCCCAAAGCG ATGCGCGAGG CCAGCTGGCA GGACCGCGTC
GACGCCCTGG GCCGCGGCCA CTACCGCCGC TACGACGAGA AGACCTCCAC CATGCTGGGC
GACGGCGCCC AACTGGCCCT CGACCGCTGG AAGGGCGACC TGCGCCGCCT CCACACCGAA
GCCGACGACC TCTCCGACGT GACTCGCCTC CTGCGCGAGT TCCCCGGCAT CGGCTCCACC
GGCGCGTCCA TCTTCTGCCG CGAGGTCCAG GGAGTGTGGA CGGACCTGGC CCCCTACGTC
GACGAGCGCA CCGCCAAGGG CGCCGACAAG CTCGGCCTAC CCACCGACGC GAACGAACTC
GCCAAGCTGG TCAAACCCGC GGACTTCCCC CGCCTGGTCG CCGGATGCGT CCGGGTAGCC
CTGTCGAAGA ACCTCCCCGA CGACCTCCGC TAG
 
Protein sequence
MAASKDVVRG LIERHGTTYA EQAGINLRDT PAPLYQLLML STLLSARIGS DIAVAAAKEL 
FTSGYRTPKA MREASWQDRV DALGRGHYRR YDEKTSTMLG DGAQLALDRW KGDLRRLHTE
ADDLSDVTRL LREFPGIGST GASIFCREVQ GVWTDLAPYV DERTAKGADK LGLPTDANEL
AKLVKPADFP RLVAGCVRVA LSKNLPDDLR