Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2013 |
Symbol | |
ID | 8883205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2136151 |
End bp | 2137422 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003510801 |
Protein GI | 291299523 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.991542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0817819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCGA AGATCGCCAC CCTGGCGGCA CTGGTCATGT TGGCGGCCAC CGGATGCGGA CTCTCCGGCG AGGACTCCGG CGGCGACGTG GACGTGTCCG GCGAGGTCAC CGGCAAGGTC TCCCTCCAGA CCTGGGCTCT GAAACCCAAG CACACGAAGT ACGTCGAGAA ACTCATCGAC GGTTTCGAGG ACAAGTACCC CGGCACCAAG GTCAAGTGGC TGGACCAGCC GGGCGACGGC TACTCCGAGA AGGTCCTCAA CCAGGCCGCC AACGACGAAC TGCCCGATGT GGTCAACCTG CCGCCGGAGT TCGCGCTGCC GTTGGCGGAC AAGGAACTGC TGCTCGACGT CGCCGATACC GACGACAAGC TGAAGAAGGA CTACCTGTCC GGCGCCATCG ACGCGTATCG CTTCCCCGGT GTCAAGGGCG CCTACGGCTA CCCGTGGTAC CTCAACACCG ACGTCAACTA CTGGAACGCC GACCTGATGA AGAAGTACGG CCTCGATCCC GACAAGCCGC CGACGTCGTT CGAGGACCTG GTGGCACAGG CAAAGACCAT GAAGAAGAAG TCCGACGGCA AGATGTTCCT GATGAGCCGC AAGCCATCCT GGGAGGACCT CACCAACGCG GGCGTCGAGA TCCTGTCGTC CGACGGCGAG AAGTTCACCT TCAACACCGA CGCGGCCGCC GAACTCCTCG ACGGCTACCG CGACGCCTAC GCCGACGGCC TGCTACCCGA CGACGTCCTC ACCGACGCCT ACCTCGGCAA CAGCGAACTG TTCAAACAGA AGAAGGTCGC CTGGTCCACC GGCGGCGGCA ACTTCATCAA CGACGTCAAG GTCGACAACC CGAAGCTGGC CAAGGACATC GTCCCGTCCA AGGCCCTGGA CACCCCGCCG CTGTACGTGC AGGGGCTCTC GGTGTCCAAG AAGAGCGACA ACCTGCCCAC CGCGGTCGCC CTGGCCCGCT GGGTGACCAA CGCCGACAAC CAGGCCGACT TCGCCGAACG GGTGCCCGGG ATCTTCCCGT CCACCACGGC TTCGGCCGAC GACGAGTCGT TCTCCGAAAG CGACGGCAGC GGCGCCGGTG ACGCCAAGAA GCTCGCTTTC GAGTCGCTGG CCGAGGCCGA ACTGCTCAAG CCGGTCGTCG TCGACGACGC CATCAACGAC GTGTTCAACC AGCAGATCTC GCTGGCCGTC AGCGGCGAGA CCAGCTCGAA GCAGGCCCTG GACAAGGCCG CCGAAGAGTG CACCAAGCTG CTGAACGACT GA
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Protein sequence | MRAKIATLAA LVMLAATGCG LSGEDSGGDV DVSGEVTGKV SLQTWALKPK HTKYVEKLID GFEDKYPGTK VKWLDQPGDG YSEKVLNQAA NDELPDVVNL PPEFALPLAD KELLLDVADT DDKLKKDYLS GAIDAYRFPG VKGAYGYPWY LNTDVNYWNA DLMKKYGLDP DKPPTSFEDL VAQAKTMKKK SDGKMFLMSR KPSWEDLTNA GVEILSSDGE KFTFNTDAAA ELLDGYRDAY ADGLLPDDVL TDAYLGNSEL FKQKKVAWST GGGNFINDVK VDNPKLAKDI VPSKALDTPP LYVQGLSVSK KSDNLPTAVA LARWVTNADN QADFAERVPG IFPSTTASAD DESFSESDGS GAGDAKKLAF ESLAEAELLK PVVVDDAIND VFNQQISLAV SGETSSKQAL DKAAEECTKL LND
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