Gene Snas_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2009 
Symbol 
ID8883201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2130716 
End bp2132461 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510797 
Protein GI291299519 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.077757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACAGCT ATATCGAGAT CACCGAGGCC GCCGCCGAGG CCGGAGCGCC GCAGCCGGCC 
ATCGGCCGGG ATGAGCTGCG GGCGGCTGCC ACACGGGGTG AGTTGGCTGG GCTTTTGGGG
GAGTTGCGGG AGGATGCCCA GCGGTCTGAC CCGTTGCCGG AGTTGCCTTA TCGGTTGTTT
CGGACGTACG TCAATGACGG GGATCGGTAT CGGTATGAGA GCCGTTATTT TGAGCGGCGA
CGGCGGCTGA ATTCTGCGGC GGTCGTTGCG TTGGTGGACG GGGGCGCGGA GAGTCTTGAG
CGGTTGTCGG ACATTCTGTG GACCATTTGT GATGAGTACA CCTGGGCGGT TCCGGCTCAC
CTGCGGTTTA ACACGATGTT GGGGCCGGAT CCGGATCGGT GCGTTGATTT GTTCGCGGCT
GAGACCGCTC ATGCGTTGGC TGAGATCGTG ACGATGTTGG GCGAGGAGTT GGAGGAGCCG
GTTCGGTATC GGGTGCGGCG CGAGGTTCGG CGGCGGGTGC TGGATCCGTT TCTGGATGAT
CCGCGGTCGC GGTGGTGGGA GACGTCTACC AATAATTGGG CCGCTGTTTG TGCTGGGTCG
ATCGGTATGG CTGGTTTGGC TCTTGAGGCC GATCCGTTGC GGTTGGCCGC GTTGCTGGAT
CGGGTGCAGC GGTCGATGGC GTCGTTTCTG TCTGGCTTCG CCGCGGATGG TGGTTGTGCG
GAGGGGATGG ATTACTGGGT TTATGGCTAC GGGTACTTCA CCTACTATGC CGAGGCGCTG
CGGGATCGTA CTGGGCTGGA TCTGTTGTCG GGTACAGGGA ACATCGCGGG GTTCCCTGCT
GCTGTCGACT TTGGCGGCGG TCGGTGCGTT AGTTTTTCGG ACGGCAAGGA TCATGTTGTT
CCGCCTACCG GGCTGATGTC GCGGTTGTCG CAGCGTTTGG ATGTGCCGCT GCCGCATATT
CAGCGGTTGT CCTCATTCGA TGATGACCAC TGTTATCGCT GGGCTCATCT GACCCGCACC
TTGGCGTGGA CTGATACGTC GGTGATTGGC CGTCCGGCGC CGCGTGGCAT CGCTTGGCTG
CCCGACCTGG CGTGGGTCAT CGACCGTTTC GATGTGGACG GTGTGGCTGT GACCGTCGCG
GCTAAGGGCG GTCATAACGA TGAACCGCAC AATCATCTTG ATCTGGGCAC TTTCATTTTG
GCGCTGGACG GGGAGCAGGT GTTGGCCGAT ATCGGTTCGG GTGTTTACGA CGCCGATTAC
TTCGGGCCCA ACCGGTACCG GGCGCTGCAT CCTTCCGCTG AGGGGCACTC GATCCCCACC
GTCGGCGGGG TTGACCAGAC TCCGGGGCGG GACAGCGAGG CTACTGTGGA GGATTTTCTG
GCTACGGACG CTCAGGTCCG CTTGGCCCTC GACTTGTCGG CTGCTTACGG CGGTACCGGC
TTCCGGCGCG TGCTCGATTG GAACCGGCGC GGGACCCTGG TCGTGTCCGA CTGCTTCACC
GAATCGGGTG CCGAACTTTC CGAGCGTTTC ATCAGTCGTG TCGAACCCGT CGTTGATGGC
CGTACCGTCA CGTGGACGGC CCGTGCTGGA ACCGTTGAGT TGCGGCTTGA CGCCGATTGG
GCCGCCGAGG TTGACCGTAT CGAGACTCTG GACCACCACG GTGAACCCGA GACCGTGTTT
CGGCTGCGAC TGACCGGAAC CACTCATCCC CGACGCGGCT TCGAATTCAC TGTCCAGATC
GGTTAG
 
Protein sequence
MYSYIEITEA AAEAGAPQPA IGRDELRAAA TRGELAGLLG ELREDAQRSD PLPELPYRLF 
RTYVNDGDRY RYESRYFERR RRLNSAAVVA LVDGGAESLE RLSDILWTIC DEYTWAVPAH
LRFNTMLGPD PDRCVDLFAA ETAHALAEIV TMLGEELEEP VRYRVRREVR RRVLDPFLDD
PRSRWWETST NNWAAVCAGS IGMAGLALEA DPLRLAALLD RVQRSMASFL SGFAADGGCA
EGMDYWVYGY GYFTYYAEAL RDRTGLDLLS GTGNIAGFPA AVDFGGGRCV SFSDGKDHVV
PPTGLMSRLS QRLDVPLPHI QRLSSFDDDH CYRWAHLTRT LAWTDTSVIG RPAPRGIAWL
PDLAWVIDRF DVDGVAVTVA AKGGHNDEPH NHLDLGTFIL ALDGEQVLAD IGSGVYDADY
FGPNRYRALH PSAEGHSIPT VGGVDQTPGR DSEATVEDFL ATDAQVRLAL DLSAAYGGTG
FRRVLDWNRR GTLVVSDCFT ESGAELSERF ISRVEPVVDG RTVTWTARAG TVELRLDADW
AAEVDRIETL DHHGEPETVF RLRLTGTTHP RRGFEFTVQI G