Gene Snas_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2007 
Symbol 
ID8883199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2128495 
End bp2129391 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510795 
Protein GI291299517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.105079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTG AACAGAAGCT GAGCGGATGG ACCGCACCGT CAAGCGTTAC CGAGAAAGAA 
AAACAAGACC GCACCGAACG ACTCATCAAG CGAGCGATGG AAAAGCATGA GCCGTTGAGC
GAAAGTAAAT GGCGGGTCTT TGCCAAGGGA TCTTACGCCA ACAATACCAA TGTCAAGTTG
GACAGTGATG TTGACATTGC AGTGGAGTGC ACCGACTGTT TTTACTCAGA TGGTGACAGC
GGCGAATCCG ACGACACAGG TCCTTATTCA GGTATTTGGA CTCCCAGTAA GTTTCGCACT
GAAGTGCAGG CTGCTTTGGA AGCGGAGTTT GCTGGCCGAG TCGACTGTTC TGGGTCGACA
GCCTTTCGGG TGAATCCCAA TAGTTCCAGT GTTGACGCGG ACGTCGTCCC ATGTTTTAGC
TACCGCTATT ATTACTCTCC TGGAAATTTT AGGGAGGGCA CAAAGGTCTT CAAGAAAGAT
GGGTCAAGTC TCGTTAACTA TCCAAAACAA CAATTGGATA TCGGTAGAGA TAAGAATAAT
CGTACTGGTC ACGCATATAA GAAAGCCGTT CGTATTATGA AGCGCGTTGA AAACGCGATG
GTTGAAGAAG ATAAGTACAA GGAGGTCCCC TCCTATCTCG TGGAATGCCT TGTTTACAAT
TGTCCAGACG ATGTGCTCCT CCGATCCACG TGGGTCGACA CTATTCGCGG CGTCATCGCT
CACATATACA ATGAGCTTGG AGGCGAAGAA CCGTTCGACG ACTCTTTGCG ATGGTGCGAG
CCTAATGACA TCAAGTACCT ATTCCATCAC TCTCAACCGT GGGGTCGCAA CGACGGACGG
AGGTTTGCTC GCGGTTTTGC TGATGCGGCT TGGGACTACC TTGGTTACGA GCCGTGA
 
Protein sequence
MTLEQKLSGW TAPSSVTEKE KQDRTERLIK RAMEKHEPLS ESKWRVFAKG SYANNTNVKL 
DSDVDIAVEC TDCFYSDGDS GESDDTGPYS GIWTPSKFRT EVQAALEAEF AGRVDCSGST
AFRVNPNSSS VDADVVPCFS YRYYYSPGNF REGTKVFKKD GSSLVNYPKQ QLDIGRDKNN
RTGHAYKKAV RIMKRVENAM VEEDKYKEVP SYLVECLVYN CPDDVLLRST WVDTIRGVIA
HIYNELGGEE PFDDSLRWCE PNDIKYLFHH SQPWGRNDGR RFARGFADAA WDYLGYEP