Gene Snas_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2002 
Symbol 
ID8883194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2124553 
End bp2125386 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510791 
Protein GI291299513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.105079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCAC AGTGTCACGA GATCGTCCGC CATGCCGACC TGGTGATGAC CGAGCACCCG 
GCATGGCGAG CCACCAGCGA CGGTTACGTA CGGATCTTCG ACCTGATCGA CTCGGGACGA
ATCATGGTGA TCGTGTCCGA CGGCCATGCC AAGGCGCAGC GTCAACTTCC AGGCGAAGCG
AACCTCGTCT GCGACCTCTA CACCCTGCAA GCCGATACCT GTCAGGACGC CTCCGAGCTA
GCAAGAGCAC TGACTTCTCA AGGGACCGTT GGTCGTTTCC GGACCACCAA CCTCTGGGAG
GCACTGGGAA CCGCCGTCTG TTTCCGTCAA GATGTCCCAG TACCCACACA TGCCTATCAC
TTCCTCTGCC TCATGTACGG CGAGCAGGTA CCACTGCCGC GGGGCGGGTA TTACCTGATG
TTCCCAACGC CGGACATCAT CGTAGAGCTC TCACCGTCAC ACTTGGCATC CTGCGGCATT
GGGGCGGTCG CCGACGTACT CATCGCCGCG GCCGACGTCT ACGCCCGATG TAGCGAAAGT
TGGAACGCAT CATCTCCGGG GGTCCTGGTG AGCGCGCTGC AAACCATCAC CGGTGTCGAT
TCGGAAGTCG CGGCCACCGC AATCGCTGAC TGGAGCGGCG ACTTCGCCTT CTACACCTAC
GCCAACACGC GGATGCGCAC TCTGGCAGCC ACGGCGGCCC CAAAAACAAC TTGGCCGCGA
ACACAAACCG AGTTCAGCCG CCGATGGCGC CACTTGGCGA ACGGTGAGCT ATCGACACTG
ACCGCGCTGA TGCTCGCCTG GGGATGGCGG CAGCATCGCA GTGCAGGGCG ATAA
 
Protein sequence
MTAQCHEIVR HADLVMTEHP AWRATSDGYV RIFDLIDSGR IMVIVSDGHA KAQRQLPGEA 
NLVCDLYTLQ ADTCQDASEL ARALTSQGTV GRFRTTNLWE ALGTAVCFRQ DVPVPTHAYH
FLCLMYGEQV PLPRGGYYLM FPTPDIIVEL SPSHLASCGI GAVADVLIAA ADVYARCSES
WNASSPGVLV SALQTITGVD SEVAATAIAD WSGDFAFYTY ANTRMRTLAA TAAPKTTWPR
TQTEFSRRWR HLANGELSTL TALMLAWGWR QHRSAGR