Gene Snas_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1998 
Symbol 
ID8883190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2119465 
End bp2120847 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510787 
Protein GI291299509 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.101502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.104668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAT TGCGGACTGT CAACTTTAGA TTGCAGGCAT TCATGGACGA GGCCGGACTC 
AACGGCGACG GGCTAGCCCG AAGCATCCGC GCGGTAGGCG ACCAGGTGGG GTTGTCGCTG
CGCTGCGGGC GCGCCACCGT CGGCCAGTGG CTGCGCGGCA GAAACCCCCG TCCCCCGATC
CCCACCCTGG CCGCCGAAGC CCTGTCCCGG GCCCTGGACC GCGACGTCTC CCCGGCCCAC
CTGGGCTTCG AGGCCGACAG CTCCGAAGAC CTGGCCTTCT GGCACGAGCG CTCGGTTGCC
GGCCAACTCC AGGTCCTCCA CCAACTCGAC AACGTGTCCG GCCCCTGCCA GAACCCCCGC
GTCTACCGGG TCGCCGCACT ACGCCCCCCA ATCTGGGACG AACCCCCACC CGACCTCGCG
CGACCATCCA CCACCCGCCC CCTGGGCACC GGCAGACTGG GCCGCGCCGA AGTCGAGGAC
GCCGAAACCA TGCTCCGCCT GTTCGGCCAG GCCGACTCCC GCGCCGGCGC CGGCCACGTC
CGTCCGGCCC TGGCCCGCTA CCTCGCCGAC CAGATCCGGG TCTGGACAAC AGCTCCGGCC
CGCGACGACA TCCGCCGCGA ACTCCTCGCC ATCGCGGCCC GGCTGGCCTA CCTGTGCGGC
TTCCTGTTCT TCGACGACGA ACTACACGGC ACCGCCCAGC GCTACTACCA CGTCGCGGCC
GAACTGGCCC GCGAAGCCGG CCGCCCGGGC CCACACGCGA TGGCCCTCCG AGCGCTCAGC
GTCCAAGCCC GCCTGCTCGG CCACCCCCGT CCGGCACTGG CCCTGGCCGA AGCCAGCCTC
TCCGACGCCC CCACCGACTG CGACCCCCTC ACCCGAGCCT TCCTCACCGG CCAACTAGCG
GTCGCGCACG CCGCCGATGG CGACCGCTAC CGGGCCCTGC GCCAACTGTC GGCCACCGAG
CACTGGTTCG CCAAGGGCTG CGACCGCGTC GACGCCCCCA TGGCCTACAA CCACGCCTCC
CTGGCCCACC AGAAAGCGGC AGTCCTAGCC CTCCTACACC AACGCCCCCA AGCAATCGCG
GCCCTAGAAC TATCGGTCCG CCAACGCCCC GCGCACGAAC GCCGCTCCCG GGCCATCACC
AAGGCCCGAC TCGCCGAACT CCAGCTGTCC CACGGCCACC TGGAACAGGC CACCGCCACC
TGGCACACCT TCCTCGACGA CTACCGCTGC ATCCTCAGCG GCCGAGCCCG CTCCGCACTC
GCGATCATGC GAGCCAGTCT GCGTCCCTAC AAGAACAACC GCCTCGCCGG TGAGGTACTA
CGACGAGCAC TAGCGCTGCC CTACGTCGGT CTGGGCGGCG GTCAGTCCAT GGTGCGGGTC
TGA
 
Protein sequence
MNPLRTVNFR LQAFMDEAGL NGDGLARSIR AVGDQVGLSL RCGRATVGQW LRGRNPRPPI 
PTLAAEALSR ALDRDVSPAH LGFEADSSED LAFWHERSVA GQLQVLHQLD NVSGPCQNPR
VYRVAALRPP IWDEPPPDLA RPSTTRPLGT GRLGRAEVED AETMLRLFGQ ADSRAGAGHV
RPALARYLAD QIRVWTTAPA RDDIRRELLA IAARLAYLCG FLFFDDELHG TAQRYYHVAA
ELAREAGRPG PHAMALRALS VQARLLGHPR PALALAEASL SDAPTDCDPL TRAFLTGQLA
VAHAADGDRY RALRQLSATE HWFAKGCDRV DAPMAYNHAS LAHQKAAVLA LLHQRPQAIA
ALELSVRQRP AHERRSRAIT KARLAELQLS HGHLEQATAT WHTFLDDYRC ILSGRARSAL
AIMRASLRPY KNNRLAGEVL RRALALPYVG LGGGQSMVRV