| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1996 |
|---|
| Symbol | |
|---|
| ID | 8883188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2116906 |
|---|
| End bp | 2118174 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hydroxymethylbutenyl pyrophosphate reductase |
|---|
| Protein accession | YP_003510785 |
|---|
| Protein GI | 291299507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.115086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.19928 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACAC ACCCCCCGTT CGAGCTGCTG ATCACCGACC ATCCCGCCAC GACCGTCGCC
GGTCCCCTCC CCCAGATCGG GGAGATCGTC GTGGGAACCG GCATCGTCGA TCCCGGCCGG
ACCGTGCTGC GAGCCGCCCC GGTGTTGCGG GGAACCCTGA CCCGGCAGGG GATTCCGGCC
CGCGGGTCCG ACCTCGGCTC ATACGGCGGT GGCGAGACCG AGGTATCGAT GCTGACCGTG
ACCGTCGAGG GTCAGCCGAT CGCGTCGCTC GTGGTGCGGT ACGGCGACCG GGCCGCTACC
CAGGCCGCGA CCGGGGTACT GGAGCGGGTG CGGCGGGCCT GGCGGCCCCG CACGGTGCTG
CTGGCGTCGC CGCGGTCGTA CTGCGCCGGG GTGGAACGCG CCATCGAGGT CGTCGAGCGG
GCGCTGGAAC GGCACGGCCA GCCGGTCTAC GTGCGCAAGC AGATCGTTCA CAACGCGCAT
GTCGTGGCGG AGTTGGAGAA GCGCGGCGCG GTCTTCGTCG ACGAACTGGA CCAGGTGCCC
GACGGCGCGA CGGTGATCTT CTCGGCCCAC GGGGTGTCAC CGGCGGTGCG CGACGACGCC
GACAGCCGGG GGCTGGCCGC CATCGACGCG ACGTGTCCAC TGGTGACGAA GGTGCACGCC
GAGGCCCGCC GGTTCGCCGA TCGCGGTGAC ACCGTCGTCC TCATCGGCCA CGATGGACAC
GAAGAGGTCG AGGGGACCAT GGGCGAGGCC CCGGAATCGA TGGTGTTGGT CGAATCGGTG
GCGGACGTGG AGCGGCTGCG GGTGCCCGAC CCGCGGCGGT TGGCGTACCT GACGCAGACG
ACGCTGGCGG TGGAGGAGAC CGAGGAGATC ATCGCCGCGC TGCGCGCCCG GTTCCCGGCC
CTGCGGGGTC CGGGTTCGGA CGACATCTGT TACGCCACCA CGAACCGGCA GCACGCCGTT
GCGGCCATCG TGGACGACTG CGATCTGGTG CTGGTGGTCG GTTCGGCCAA CTCCTCCAAC
TCACGGCGGC TCGTGGAGCT GGCCGAGCGG CACGGCCGGA TGGCGCGGCT CATCGACTCC
GCCGAGGACA TCGAGCTGGA CTGGCTGACC GGAGCCGACA CCGTCGGGCT CAGCGCCGGG
GCCTCGGCGC CGCAGATCCT CATGGACGAG GTGGTCGAGA CACTGGCGGG TTTCGGGCCC
ATCGACGTCG TCGAGCGGGT GGTCACCGCC GAGGACCAGT CCTTCGTGCT GCCCCGGGAG
GTACGTTGA
|
|---|
| Protein sequence | MSTHPPFELL ITDHPATTVA GPLPQIGEIV VGTGIVDPGR TVLRAAPVLR GTLTRQGIPA
RGSDLGSYGG GETEVSMLTV TVEGQPIASL VVRYGDRAAT QAATGVLERV RRAWRPRTVL
LASPRSYCAG VERAIEVVER ALERHGQPVY VRKQIVHNAH VVAELEKRGA VFVDELDQVP
DGATVIFSAH GVSPAVRDDA DSRGLAAIDA TCPLVTKVHA EARRFADRGD TVVLIGHDGH
EEVEGTMGEA PESMVLVESV ADVERLRVPD PRRLAYLTQT TLAVEETEEI IAALRARFPA
LRGPGSDDIC YATTNRQHAV AAIVDDCDLV LVVGSANSSN SRRLVELAER HGRMARLIDS
AEDIELDWLT GADTVGLSAG ASAPQILMDE VVETLAGFGP IDVVERVVTA EDQSFVLPRE
VR
|
|---|
| |