| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1995 |
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| Symbol | |
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| ID | 8883187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 2115122 |
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| End bp | 2116903 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003510784 |
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| Protein GI | 291299506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.57499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.632922 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGG ACGTCTTGTC CCTGCTGGCC GAGCCCGGTG CGGTCCGGGC GCTGGCCGCC
GACCGGCTGC CCGCGCTGGC GGCCGAGATC CGCGCATTCC TCGTCGACCG GGTGTGCCGC
ACCGGCGGTC ACCTGGGCCC GAACCTGGGG GTGGTGGAGT TGACGATCGC CCTGCACCGG
CGCTTCGACT CCCCCACCGA CGCGATCGTG TTCGACACCG GCCACCAGTC GTATGTCCAC
AAGATCCTGA CCGGGCGCGC CCGAGATTTC GGGCGGCTGC GGCAGCGCGA CGGTTTGTCG
GGTTACCCGA GTCGCGCCGA GTCGCCGCAC GATCTGGTGG AGAACTCACA CGCCTCGACC
GCGCTGTCCT ATGCCGACGG TCTGGCCCGG GTGTTCGCGC TGCGCGGGCA ATCCGAGCGG
TACGTGGTGG CCGTCGCGGG GGACGGCGCG ATGACCGGCG GGCTGTGCTG GGAGGCGATG
AACAACATCG CCACCGCCGG GCACGAGCGG CTGGTGATCG TCCTCAACGA CAACGCCCGC
TCCTACTCCC CCACGGTGGG CGGCTTCGCC GAACACTTGC GGCGGTTGCG ATCCGGCGAC
GCGGACGGCT CGATGTTCGG CCAGCTGGGG CTGGACTATC TCGGGCCGGT GGACGGGCAC
GATCTGGCGG CGCTCGACGC GGCGCTGGCC AAGGCGAAGC GGGCGGGGCG GCCGACGGTG
GTCCACGTCG TGACCACGAA GGGCCACGGC CACGAACCGT CCGAACGCGA CGAAGCCGAC
TGTCTACACG CGGTCGGGGT AGTGGATCCC GACACCGGCA GGCCGGTCAA GCCCACGGCG
GCGACCTGGA CCGATGTCTT CGGCGAGGAG ATCGCGGCCA TCGGCGAGAC GCGCCAGGAC
GTGGTGTGCC TGACGGCGGC GATGCTGCGC CCGGTGGGGC TGGCGGCCTT CGCGAGCCGG
TTTCCCGAGC GGGTCGTCGA TGTCGGTATC GCCGAACAGC ACGCGGTGTG CTCGGCGGCC
GGGATGGCCA CGGCGGGAGC GCATCCGGTG GTGTGCGTCT ACTCCACGTT CCTCAATCGA
GCCTTCGACC AGGTCGTCAT GGACGTGGCG CTGCACCGGC TGCCGGTCAC GTTCGTCCTG
GACCGGGCCG GGGTCACCGG CCCCGACGGG CCCAGCCACC ACGGGATGTG GGACTCGGCG
GTGCTGCCGG TCGTGCCGGG GTTGCGGGTG GCCGCGCCCC GGGACGCGGC CGGGCTGCGG
GAACTGTTGC GCGAGGCCGT CGACGTCGAC GACGGGCCGA CCGCGATCCG GTTCCCCAAA
GCCTCAGCGG GCGAGGACAT CCCGGCGGTG GCGCGGGTGG ACGGCATCGA CGTGCTGCAT
CGCGGCAGCC GGTCCGGTTT GGACGTTCTG CTGGTCGCCG CCGGGGTCAT GGCGGGGCCG
TGCCTGGACG CGGCGCGGCG GCTGGAGGCC GAGGGCATCG GTGTCACGGT CGTGGATCCG
CGCTGGATCG CACCGGTCCA TCCGACGCTG CCACACCTGG CGGCCCGGCA CCGGCTGGTC
GTCACCGTCG AGGACGGCAA CCGCACCGGC GGCATGGGGG TTCAGCTGGC GCAGGCGTGC
GCCGACGCCG CGGTGGCCAC GCCGGTGCGC AACCTCGGGC TGCCCCGGCG GTTCCTGGAG
CACGGCGTTC GCGGCGAACT GTTGGCCGCG TACGGGCTCG ACGGCGAGTC CGTCGCACGA
CACACCCGCG AGGCACTGAC GGTCGGTGTC GCGACGCGCT AG
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| Protein sequence | MTPDVLSLLA EPGAVRALAA DRLPALAAEI RAFLVDRVCR TGGHLGPNLG VVELTIALHR
RFDSPTDAIV FDTGHQSYVH KILTGRARDF GRLRQRDGLS GYPSRAESPH DLVENSHAST
ALSYADGLAR VFALRGQSER YVVAVAGDGA MTGGLCWEAM NNIATAGHER LVIVLNDNAR
SYSPTVGGFA EHLRRLRSGD ADGSMFGQLG LDYLGPVDGH DLAALDAALA KAKRAGRPTV
VHVVTTKGHG HEPSERDEAD CLHAVGVVDP DTGRPVKPTA ATWTDVFGEE IAAIGETRQD
VVCLTAAMLR PVGLAAFASR FPERVVDVGI AEQHAVCSAA GMATAGAHPV VCVYSTFLNR
AFDQVVMDVA LHRLPVTFVL DRAGVTGPDG PSHHGMWDSA VLPVVPGLRV AAPRDAAGLR
ELLREAVDVD DGPTAIRFPK ASAGEDIPAV ARVDGIDVLH RGSRSGLDVL LVAAGVMAGP
CLDAARRLEA EGIGVTVVDP RWIAPVHPTL PHLAARHRLV VTVEDGNRTG GMGVQLAQAC
ADAAVATPVR NLGLPRRFLE HGVRGELLAA YGLDGESVAR HTREALTVGV ATR
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