Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1993 |
Symbol | |
ID | 8883185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2112615 |
End bp | 2113982 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_003510782 |
Protein GI | 291299504 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.62244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGGC GACCGGAATC CCACGGCGCT GTCTCCAGCC TGACCACGGC GGCGGCCCGC AACCTGGCCA CGACCACCAA GTCGGTCCCG TTCATGGCCG GGCGAACGCC CCGCTGGCTG TTGCGGGTGC TGCCGTGGAA ACCCGTCTCC GGTGGCTTCT ACCGGGTGAA CCGGCGACTG AGCTACCCGG TCGGTGAAGG CCGGGTGGCG CTGGTGGGAC CGGTAGACGG GCTCGGTGTG TTCCCGCCGA GCCTGACCGA GATTCCCGGC TTGCGCGGCT TCGGTGATCC GGACGTGCTG ACCGAAGTGG CCCAACGGTT CCGGCGCCAC GACGTCGCGT CCGGAACCGT GATAGCCGAG GCCGGGAGCC CACAGACCCG GCTGGTGGTC CTGGCACACG GAAAGGCCCA CAAGTTGGGA CGTGGCCGCT ACGGCGACGC GACTTTGGTC GGAGTCGCTG CCGATGGCGA CCACTTCGGC GGCCAGGTCC TCACCGGTGC GGCTGGGACC TGGCCGTTCA CGCTCAAGGC GACCACGCCG TGCACGCTGC TGGAACTGTA TCCCGCCACC GTGGCCGAAA CCCTGTCCAC CGTGCGGGAA CGGCTCGCCG AGCGCCCCGA CCGGCCCCGG CCGCCGCTCA CCAAGCACGG CGAGGTCAGC CTCGACCTCG CCGCCGGACA CGACGGCGAA CCGGTGCTGC CGGGGACCTT CGTCGACTAT GAACTGTCCC CTCGCGAATA CGAGCTGGGC GTCGCCCAGA CCGTGCTGCG GGTCCACACC CGGGTATCCG ACCTGTTCAA CGACCCGATG GACCAGCTGG AGCAACAGCT GCGGTTGACC GTCGAAGCGC TGCGGGAACG ACAGGAACAC GAGATCGTCA ACAACCCCGA CTTCGGGCTG CTGAACAACG TGGACAACCG GCAGCGGCTG TACACCCGCA CCGGCCCGCC CACCCCCGAC GACATGGACG CGCTGCTGTC CCGACGCCGC CGCACCGGCT ACTTCCTGGC CCACCCGCGC ACCATCGCCG CCTTCGGCCG CGAGTGCAAC CGTCGCGGCG TCCACGCGCC CGCCACCCGG GTCGAGGAGC AGATCGCCCC GACCTGGCGC GGCGTCCCGA TCCTGCCCTG CGACAAGATC CCGGCAAACG CCGACGGCAG CGGCTCCATC ATCGCGATGC GGGTCGGCGA GGACCACGGC GGCGTCGTCG GCCTGTGCGC CGCCGACCTG GCCGACGAGT ACGCCCCCGG CATCGCCGTC CGGTTCACCG GCGTCGACAC CAAGGGCGTG GCCTCCTATC TGGTCACCGC CTACCACTCG GTGGCCTCAC TCCTTCCCGA CGCCTTCGGC GTCCTGGAGA CCGTCTGA
|
Protein sequence | MSRRPESHGA VSSLTTAAAR NLATTTKSVP FMAGRTPRWL LRVLPWKPVS GGFYRVNRRL SYPVGEGRVA LVGPVDGLGV FPPSLTEIPG LRGFGDPDVL TEVAQRFRRH DVASGTVIAE AGSPQTRLVV LAHGKAHKLG RGRYGDATLV GVAADGDHFG GQVLTGAAGT WPFTLKATTP CTLLELYPAT VAETLSTVRE RLAERPDRPR PPLTKHGEVS LDLAAGHDGE PVLPGTFVDY ELSPREYELG VAQTVLRVHT RVSDLFNDPM DQLEQQLRLT VEALRERQEH EIVNNPDFGL LNNVDNRQRL YTRTGPPTPD DMDALLSRRR RTGYFLAHPR TIAAFGRECN RRGVHAPATR VEEQIAPTWR GVPILPCDKI PANADGSGSI IAMRVGEDHG GVVGLCAADL ADEYAPGIAV RFTGVDTKGV ASYLVTAYHS VASLLPDAFG VLETV
|
| |