Gene Snas_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1966 
Symbol 
ID8883158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2085048 
End bp2085761 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510755 
Protein GI291299477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.69738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC TGTGGGTCGT GTGCGGCGCT TTCTTCGCGT GGCGCACTCC CGCCTATCTC 
GGCTTCACCC CCGAGGCGTC CTTCGTGGCG CTGCGCGACA ACACCCACTA CTTGATGCTG
TCCGCCCACG TGGTGCTGGG AACCGTCACC CTGACCTGTT GCTGCCTGCA ACTGTGGCCA
TGGCTGCGGC AGCACCACCC CAAGGTGCAC CGGATCAGCG GACGGATCTA CGTCACCGCC
GTGATCCCGG CCAGCGTCCT GGCCTTCGTT TCGGCCGTGT GGCAGGACCT CCCGGTGCCC
GGACGGATCA GCAACATGAC CCTGTCGATC CTGTGGCTGC TCATGACGAT CGCCGGTTTC
CGGATGGCCC GCGCTCGCCG GTTCGCCGAA CACCGGCGCT GGATGATCCG CAGCTTCGCG
CTGTGCATTT CCATCATCGC CAACCGGGTC TGGACCGGCA TCATGGTCGT CGCGCTCATG
CCGTTCACCG ACAGTGTCTA CGGCGGTGAC TGGGACGCCA TGTTCATGGA CGCCGCGCTC
GCCGCGGTGT GGCTGAGCTG GATCGTGAAC CTGCTCATCG CCGAGTGGTG GATCGAGCGC
ACCCGACGGC CGCGCCCGAA GCCGCCGACC GGACCGGTCA CCGGCGACGG CACCCGTCCC
GCGGCCGTGG CGGGCCACCG TGACACGCCG CCGGTTCCAC TATCCGGGAG TTAA
 
Protein sequence
MIPLWVVCGA FFAWRTPAYL GFTPEASFVA LRDNTHYLML SAHVVLGTVT LTCCCLQLWP 
WLRQHHPKVH RISGRIYVTA VIPASVLAFV SAVWQDLPVP GRISNMTLSI LWLLMTIAGF
RMARARRFAE HRRWMIRSFA LCISIIANRV WTGIMVVALM PFTDSVYGGD WDAMFMDAAL
AAVWLSWIVN LLIAEWWIER TRRPRPKPPT GPVTGDGTRP AAVAGHRDTP PVPLSGS