Gene Snas_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1952 
Symbol 
ID8883144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2073444 
End bp2075633 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content68% 
IMG OID 
ProductMMPL domain-containing protein 
Protein accessionYP_003510741 
Protein GI291299463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0752797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCA ACGCTTCTCC CCCACGGACG TTCACCGTCC GGATGGCGTC CTGGAGCGCC 
GTACACCCGT GGCGGGCGAT ACTCGTCTGG ATCGGCTTCG TGGCCGTCGT CTTCGGCGTC
GGCTCCGCGA TGGGCACCCA GCAGACCGAG TTCTCCGACT TCTGGGTCGG CGAGGCCGGT
GAGGCCGAGG CCATGGCCGA GGACGCCGAC ATCGCGGCCC CGGCTGTGGA AAAGGTCCTG
ATCACCGCCA AGGACGGGAA ACTGGACCCC GAGCTCGCGG CCAAGGCCGC CGCCGACGTC
GAAAAGCGTA TGGACGCGTT GACCGAGGTG TCGGACATCG CCGGCCCGGA GACTTCCAAG
GACGGCGAAT CGGTACTGGT GTCGCTCACC ATGTCGATGC CCGCCCATGA GGCGCCCGAC
CACATCGAGC CGCTGTTGGA GACCACCGAA GCCGTCCAGG CCGACCACCC CGACGTGAAC
GTGCGCCAGA CTGGCGACGA GTCGGTGTCG CACCAACTCG ACAACCAGCT GGGGTCGGAC
CTGGGACGCG CCGAGCTGTT CACCATGCCG ATCACCCTGA TCATCCTGTT CGCCGTGTTC
GGGTCGCTGC TGCTGGCCGG AGTGCCGCTG CTGCTGGCGA TTTCGTCCAT CATGGCCTCG
ATGGGGATCT ACGCGATCGC CTCGCACTTC TTCCCCGACG CGGGCGGCGC GGTCACCAGC
GTCCTGGTCA TGATGGGTAT GGCCGTGGGC GTCGACTACT CGCTGTTCTA CGTCAAGCGG
GTCCGCGAGG AACGGGAACG CAACGGCAGC CTCAGTCAGG CCGCGGCGGT CGAACTGGCC
GCCCGCACCT CCGGGCACGC CATCCTGGTG TCGGGTGTGG CGGTCGTGGT GTCCATGGCG
GGTCTGTACC TGTCGGGCGA CGTCATCTTC TACTCGATCG CCACGGCCTG CGTCATCGTG
GTGGCCGTCG CGATGATCAG CTCGCTGACC GTACTTCCGG CGCTGCTGGC CAAGATGGGC
AAGCGCGTCG ACGGTCGCCG CCGCCGGGCC CGTAAACCCG CCCGGCTGTG GCCCGCGATG
CTGCGCCCGG TGATGAACCA CCCGGTGGCC AGTGTCCTCA TCGGTGGGTT GGTGCTGGTC
GCGCTGGCCG CGCCCGCGCT GGGCATCAAG CTGAGCGTCG AGGGCAAGGA GACCTTCCCC
AAGTCGCTGC CGACCCTGGC CACCTACGAC GAGATGACCG AGGCGTTCCC GGACAAGGGC
GTGCTGCACA AGGTGGTGGC GCGCGTCGAC GCCGAGCACA CCGACGAACT GGCGGCTACG
ATGCGGCGAC TGTGGGAGGA GACCTCCGAC AACGAACTGT TCAGCCCCAC CACCGAGCCG
CGGCTCCTGG TCTCGAAGGA CGAGCGCACC GCCGCCCTGG AACTGCCGGT CCCCTACCCC
ACCAGCGACG ACCGGGCCGC GCGCTCGCTC GAACTGCTGC GCGGTGACCT GGTGCCGAAG
GAGTTCGCCA AGATCGACGG CGCCGAGTTC GCGGTCTCGG GTGAACCCGC CTACGCCCAC
GACTACTCCG AACTTCAGGC GACGCACCTG TTCTGGGTGG TCGGGTTCGT CCTGGTGGCG
ACCTTCGTCA TGATGCTCAT CGCGTTCCGG TCCGTGGTGC TGGCCGCCGT CGGTCTGGGT
CTCAACCTGC TGTCGGTGCT GGCGGCCTGG GGTTCGCTGG TGCTGGTGTT CCAGGGCGAG
TGGGCCGAGG GACTGCTGGG CTTCGACTCG CCGGGTTTCA TCGGGTCGCG CACCCCGCTG
ATGGTGTTCA CGATCCTGTT CGGACTATCG CTGGACTACC AGATCTTCGT GATCAGCCGG
ATCCGGGAAC ACGCGCTGCG CGGCGAGTCC ACCCGGCAGG CGGCCTACAA CGGCATCCTG
TCCTCGGCCG GGGTGGTGTC CAGCGCGGCG ATCATCATGG TGTCGGTGTT CGCGGCCTTC
ATGCTGATCG ACCGGATCGA GATGAAGCAG CTCGGCTTCA CGCTGGCGCT GGGAGTGCTG
CTGGACGCGG TGGTGGTGCG GATCCTCATC CTGCCCGCGC TGCTGAGTTT GCTGGACCGC
AAGAGCTGGT GGCCGTCGGC GTTGTCGAAG CAGCCCGAAC CGTCGGACCG CGCCAGTGGT
GCGACGGACC CGGTCACCGT TCGCGCATAG
 
Protein sequence
MHTNASPPRT FTVRMASWSA VHPWRAILVW IGFVAVVFGV GSAMGTQQTE FSDFWVGEAG 
EAEAMAEDAD IAAPAVEKVL ITAKDGKLDP ELAAKAAADV EKRMDALTEV SDIAGPETSK
DGESVLVSLT MSMPAHEAPD HIEPLLETTE AVQADHPDVN VRQTGDESVS HQLDNQLGSD
LGRAELFTMP ITLIILFAVF GSLLLAGVPL LLAISSIMAS MGIYAIASHF FPDAGGAVTS
VLVMMGMAVG VDYSLFYVKR VREERERNGS LSQAAAVELA ARTSGHAILV SGVAVVVSMA
GLYLSGDVIF YSIATACVIV VAVAMISSLT VLPALLAKMG KRVDGRRRRA RKPARLWPAM
LRPVMNHPVA SVLIGGLVLV ALAAPALGIK LSVEGKETFP KSLPTLATYD EMTEAFPDKG
VLHKVVARVD AEHTDELAAT MRRLWEETSD NELFSPTTEP RLLVSKDERT AALELPVPYP
TSDDRAARSL ELLRGDLVPK EFAKIDGAEF AVSGEPAYAH DYSELQATHL FWVVGFVLVA
TFVMMLIAFR SVVLAAVGLG LNLLSVLAAW GSLVLVFQGE WAEGLLGFDS PGFIGSRTPL
MVFTILFGLS LDYQIFVISR IREHALRGES TRQAAYNGIL SSAGVVSSAA IIMVSVFAAF
MLIDRIEMKQ LGFTLALGVL LDAVVVRILI LPALLSLLDR KSWWPSALSK QPEPSDRASG
ATDPVTVRA