| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1945 |
|---|
| Symbol | |
|---|
| ID | 8883137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2067960 |
|---|
| End bp | 2069081 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Platelet-activating factor acetylhydrolase plasma/intracellular isoform II |
|---|
| Protein accession | YP_003510734 |
|---|
| Protein GI | 291299456 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.467167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGCA AGTGGTTGCT CGCCGCCGCC GTGACCGCGG TGGCGGTGTC CGGGGCCGCC
GTCGCGGTCA CCGGGCACGC CCAGGAGAAC GACGCCGAGG GGCTGGCGCT GATCGAACCC
ACCGGGGATC ACGCCGTCGG GACCACGATG GTGCAGCTGG AGGACTCCAC ACGGGACGAC
ATCTGGGCCC CGGAGGAGAA GCGGCGGCTC ATGGTGTCGC TGTACTACCC GGCCAAACCC
GGCGGTGACG GCGAAACGGC GCCGTACCTG ACCTACGAGG AGTCGAAACA GTTCCTGGAG
AAACCGGCTC CCGACGCACC GCCCGACGCG CTGGCCAAGG TCCGCACCCA CGCCCTGGTC
GACGCCAAAC CCGACACAAA GGACGACGAC CGGCCGCTGG TCATGCTGTC GCCCGGATTC
GGGTTCCCCC GCGCCACCCT CACCGGCCTG GCCGAGGAGC TGGCCAGCCA CGGCACCATC
GTCGCGCTCG TCGGCCACAA CTACGAGGCA CCCACCACCT TGCTCGACGG CACCACCACC
CCGTGCCTGG CCTGTAGCGG CGGCAACGAC GGCGAGAAGG TCGCCGACAA CCGGGCGAAG
GACCTGTCGT TCGTCCTGGA CACCTTGACC GGGAAGAAAT CCCCGTGGAA GGGATCGAAA
CTGATCGACA CCGACGCGGT CGCGGTCGGC GGCCACTCCA TGGGCGGCGC CAGCGCCCAC
ACGGCGATGG TCGGCGACCG GCGCTTCGAC GCCGGGTTCA ATCTGGACGG TACCTTCCAC
CCCGAGAAGG GCAGGAAGCT CAACCGGCCG TTCATGATGG TGGGCGCGCA GAAGCACGGC
CAGCCCGGCG CCGACAAGAG CTGGACCGAC AGGTGGGGCA AACTGACCGG CTGGAAACGC
TGGCTGTCGG TCAAACAGAC CGGCCACAGT TCGATGACCG ACGTCGGATA CCTGGGGCCC
AAGATCGGTG TGCCGCAACA GGAGCTGGAC GGTGAGCGCT GCACCGAGAT CGCGCGGGAG
TACGTGTCGG CGTTCGTCGA CACACAGCTG CGCGACGAGG ACGACCCGAT TTTGGACGGT
CCGAGCCAGG AATTCCCCGA GGTTTCGTTC CACAGCCCGT AA
|
|---|
| Protein sequence | MRRKWLLAAA VTAVAVSGAA VAVTGHAQEN DAEGLALIEP TGDHAVGTTM VQLEDSTRDD
IWAPEEKRRL MVSLYYPAKP GGDGETAPYL TYEESKQFLE KPAPDAPPDA LAKVRTHALV
DAKPDTKDDD RPLVMLSPGF GFPRATLTGL AEELASHGTI VALVGHNYEA PTTLLDGTTT
PCLACSGGND GEKVADNRAK DLSFVLDTLT GKKSPWKGSK LIDTDAVAVG GHSMGGASAH
TAMVGDRRFD AGFNLDGTFH PEKGRKLNRP FMMVGAQKHG QPGADKSWTD RWGKLTGWKR
WLSVKQTGHS SMTDVGYLGP KIGVPQQELD GERCTEIARE YVSAFVDTQL RDEDDPILDG
PSQEFPEVSF HSP
|
|---|
| |