Gene Snas_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1940 
Symbol 
ID8883132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2061540 
End bp2062340 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510729 
Protein GI291299451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.474344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCT CGATCTCGCG CCGGAGTCTG CTGGCGGCCA CCGGGGTGAC CGTGGCGGCG 
GCCGGACTGG CCTACACCAC GGCGGAAGCG TCCACGGTGG GCAAAGCGGA GTGGCAGGAG
CGCTGGGCCC CCGATCCCGG CTCCGACGGC CTGGACGCCT TCGAGGGCGT CGAGGACGAC
CGCGCCGACT CGCATCCCGA CGGGCAGCCA CACATCTATG TGGAGGACGA CGCCTACCGG
TTCAACATGC ACATGGAGGA CGTCGACAGC CACACCGACC GGCAGCGGCA GGAGGTCAAG
GGGATGCGCA CGCCCGCGGG CGGCGACTTC CTGGTGATCG AGCCGGGCTC GACCTGGCGG
CTCAACTATC AGGTGTTCAT CCCCGAGACC CTGCTGGCCA CCAAGACCTT CACGCACATC
ACGCAGCTGT ACAGCCCGAA GATCGGCCCG GCCATGATGA TCTCGCTGCG GCGGGTCGAC
GGCGTCGAGA CGATGGAACT GAAGGACCAC CCGCAGGACA TCCTGGTCGA ACGCACCGAG
CTGGCGCCGC TGAAGGAGCG CTGGATCGAC ATCGAGCTGG AGATCCTGGC CGGGGACGCC
CCCGACGGCG CGGTGCGCTG GGTGGTCAAG GATGGTTCGC AGACGATCGT CGACGTCAGC
AAGGACGGAC TGGGAACCAG TCTCGAAGGG GTCCGGATCC GTCCCAAGTG GGGCATCTAC
CGTTCCCTCG AGGACGACAC GGGTTCGCTG CGGGACTGTC ATCTGCTGAT GCGCGGAATG
CGCGCCTACG AACAGGTTTG A
 
Protein sequence
MSASISRRSL LAATGVTVAA AGLAYTTAEA STVGKAEWQE RWAPDPGSDG LDAFEGVEDD 
RADSHPDGQP HIYVEDDAYR FNMHMEDVDS HTDRQRQEVK GMRTPAGGDF LVIEPGSTWR
LNYQVFIPET LLATKTFTHI TQLYSPKIGP AMMISLRRVD GVETMELKDH PQDILVERTE
LAPLKERWID IELEILAGDA PDGAVRWVVK DGSQTIVDVS KDGLGTSLEG VRIRPKWGIY
RSLEDDTGSL RDCHLLMRGM RAYEQV