| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1932 |
|---|
| Symbol | |
|---|
| ID | 8883124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2053295 |
|---|
| End bp | 2054467 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003510721 |
|---|
| Protein GI | 291299443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.472567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGA GACAAACACC CGGAGTTCCC CAACTCCTGC GCGTTCTCAA TGACCGCGCG
GCGCTGAATC TGCTGTTCAC CAACGGACCG CAGACCCGCG CTCAACTGGC CCAGGCGACC
TCACTGTCGA AGGTCACGGC CTCCCAGATG GTGGAACGAC TGGAGTCGCG CGGCCTGATC
AAGGCCGTCG GCACTCGGCC GGGTAACCGT GGTCCCAACG CACAGGTCTA CGCGGTGGTG
AGCACCTACG CCTACGTGGC GGGCGTCAAC GTCGGCCCCC ACTCGGTCAC CGTCGACATC
GCCGACCTGA CCGGCGAGGT CGTCGGCCGC GTCGAACTGG AGACCCGCGA CGCCGACGAC
CCGGTGGCCG TGGTCCACCG CGCCGTCACC GCCGCCTCCG CCAACGCCAA GATCCAGCTC
GAGGACGTCG ACCGCGTCGT CCTGGCCACC CCCGGCATCG TCAACCCCGA CTCCAACGAC
ATCGACTTCT CCTGGGACCT CCCCGCCTGG CACCGCGGCC TGCACGAAGC CCTCGAAAAG
GACCTGCGCC GACCGGTCGT CATCGAGAAC GACGTCAACC TCGCCGCGGT CGCCGAACAC
CGCGACGGCG CGGCCCGCGG CGTCGACGAC TTCGTCTACG TCTGGTTCAG CCGCGGCCTC
GGCGTCGGCG TCGTCCTGGG CGGCAAACTC CACCGCGGCG CCCGGGGCGG CGCGGGCGAG
ATCGGCTACC TGGCCGTACC CGGCGGCTCC CTCCCGGAGG AATCGGTGAC CCGCCGCGCC
AAGGGCTCGT TCCAGAAACT CGTCGGCGGC GACGCCGTCC AGGAACTGGG CACCGAACAC
GGCTTCACAC AGGACACCCC CGAGGCGATG GTCGCCGCGG CCCTGTCCGC GGGCGACGCG
GGCGAGAAGT TCCTCGACGA ACTCGCCGAC CGCATGGCCC TGGGCGTGGC GGGCGTGTGC
TCGGTCCTCG ACCCGGCCCT GGTCGTCCTG GGCGGCGAGG TCGGCTACGC GGGCGGAGCG
GGCCTGGCCG ACCGGGTCGG AGCCGCGATC CAGGACATCG CACCACTGTC CAGCCAGGTC
GTCGCCGGAA CCGTCAGCTC CGGCCCCATC CTGCGTGGAG CCCTGCGCGT CGGCCTCGAC
GCCGTCCGGG AGGGACTCTT CTCAGAAGAG TGA
|
|---|
| Protein sequence | MTRRQTPGVP QLLRVLNDRA ALNLLFTNGP QTRAQLAQAT SLSKVTASQM VERLESRGLI
KAVGTRPGNR GPNAQVYAVV STYAYVAGVN VGPHSVTVDI ADLTGEVVGR VELETRDADD
PVAVVHRAVT AASANAKIQL EDVDRVVLAT PGIVNPDSND IDFSWDLPAW HRGLHEALEK
DLRRPVVIEN DVNLAAVAEH RDGAARGVDD FVYVWFSRGL GVGVVLGGKL HRGARGGAGE
IGYLAVPGGS LPEESVTRRA KGSFQKLVGG DAVQELGTEH GFTQDTPEAM VAAALSAGDA
GEKFLDELAD RMALGVAGVC SVLDPALVVL GGEVGYAGGA GLADRVGAAI QDIAPLSSQV
VAGTVSSGPI LRGALRVGLD AVREGLFSEE
|
|---|
| |