Gene Snas_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1927 
Symbol 
ID8883119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2043896 
End bp2048779 
Gene Length4884 bp 
Protein Length1627 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNAD-glutamate dehydrogenase 
Protein accessionYP_003510716 
Protein GI291299438 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGCAA TGGCCGCGGA CGACGATGAC CGGAACATCG ACGAGGAACT GCCCAATCGG 
GACACACTGA TCACCGAAGC GGTGACGTTG GCGGGGAACG ACGCCGATCT GGCCGAGCTG
ATCGCCATGT ACTGGCGGTT CGTCCCCGAC GAGGATCTGG CGGGGCGTAC GGCGACCGAC
CTGTACGAGA CCACTGTGGC GCATCGGGAG CTGGCCTGGC AGCGGCTGCC CGGTGAGGTG
AAGCTGTCGG TCACGACGCC GCCGATGCCG GAGGAGAACG GCGAGGGTCC CATCGCGGTG
TGCCACACCG AGATCGACAT CGTCACCGAC GACATGCCGT TCCTGGTCGA CTCGATCACC
GCCGCGTTGA CCCGCCGGGA CCTCGACATC CACGTGGTGG TGCACCCGCT GGTGTTCGCC
CGGCGCGAGG TGATGGGCGC GCTGAGTAAG GCCCCGTGCG CCAAGGGTGA GGACGACATC
GTCCGGGAAA GCTGGATGCA CTTCGAGGTG GACCGGCTGC GCGACTCCCA GGCCGCCGAA
GAGGTGCACA ACGCCATCCT CAAGGTGCTC ACCGACGTGC GCGAGTGCGT CGAGGACTGG
CCGAAGATGC GCGACGCGGC GTTCGCTCTC GCCGAGGAGA TCGACGCCGA GGGGCACCGG
CTCCCGGTTC CCGAGCGGGA CCTCAACGAC GCCGTGGGGC TGCTGCGGTG GCTGGCGGAC
AACAACTTCA CCTTCCTCGG TTACCGCGAG TACCGGCTCG CCGACACCCC CGAGGGGCAG
GCGCTGGCGG CGGCGCCGGG CACCGGACTG GGTCTGTTGC GCGCCGACCA GACGGCTCCG
AAACTGTTGA GCAGCATGAC TCCCGAGGCC TATGAGCGGG TCATGGAGAA GCGGCTGCTC
ATCGTCACCA AGACCAACTC CAGGTCCACC GTCCACCGCA ACTCCTATAT GGACTACATC
GGGTTCAAGA TCTTCGACGA CGAGGGCAAC GTCGTCGGCG AACGCCGGTT CCTGGGCCTG
TTCACCTCGA CGGCGTACCT GTCGTCGGTC AAGGACCTGC CGCTGGTCAG CCGCAAGGCG
GCCGAGGTCA TGGAGCGCAG CGGCCTGGCG GCCAACAGCC ACTCCGGCAA GGACCTGATG
GCCATCCTGG AGACCTACCC CCGCGACGAG CTGTTCCAGA TCCGCACCGA CGACCTGTAC
CGCACCGTCA CCGACGTGCT GCGGCTGGCC GGACGGCGGC GGCTGCGGTT CTTCGCCCGC
CGCGACACCT ACGGCCGGTT CTTCTCCTGC CTGATCTACC TGCCGCGCGA CCGGTTCAAC
ACCGACAACC GCCACAAGAT CCAGAAGATC CTGATGAAGC GGCTCAACGG TGTCGGCATC
GACTTCTCCA CCCATGTGTC GGAGTCGGTG CTGGCCCGCA TCCACATGAC GGTGCGCGTC
GACCCGGCCA ACCAGCCCGG CGACATCGAC GAGGCCGCGA TCCAGGAGGA ACTGGTCGAG
GCCACCCGCT CCTGGGACGC CGACTTCTCG ATGCTGCTGG ACCGGCAGCT GGGCGACGAA
CAGTCCAAAG AGGTGTACTC GCGGTACGTC GACGCGTTCA CCAACACCTA CAAGGACAGC
CACTCGCCCA AGGAGGCCGC CAAGGACATC GCCAAGTTCG AGCTCGTCGA CGAGCCCGGC
GAACTGGCGC TGCACCTGTA CCGGCGCCGC AAGTCCGACA CCGACGTGCG GTTCAAGGTG
TTCCGCTTCG GCGAGCCGAT GATGCTGTCG GCGGTACTGC CGGTGCTGCA TTCGCTGGGC
GTCCAGGTCA GCGACGAGCG TCCCTATGAG ATCGCCCGCG AGGACGGCAC GATCTTCCTG
CACGACTTCG GTCTGGTGAT GCCCGACGAC CTGCCGGTGC AGGTGCCGCA GGTGCGCGCC
ATCGTCGAGA ACGCCTTCTC CGCGTCGTGG CGCGACGAGG CCGAGACCGA CGGCTTCAAC
GAGCTGGTGC TGCGCGCCGG GATGACCTGG CGGCAGGTGG TGATCCTGCG CGCCTACGCC
AAGTACCTGC GTCAGGCCGG GACCGTCTAC ACCGCCGGGT TCATGGCCGC GACGCTGGCC
GCCAACCCGA AGCTGTCGAC GATGCTGGTG TCGCTGTTCG AGACCTACTT CGACCCGAGC
CTGCAACTGA CCACCCAGGG CCGCGACGAG GCCGCCGAGA AACTGACCGG CGAGTTCCTC
ACCGCGCTGG AGGACGTTCC CAGCCTCGGC GCCGACCGGA TCCTGCGCTC CTACCTGGCG
CTGATCCAGG CGACCCTGCG CACCTCGTAC TACCAGAAGG GCTCCTCCGG CCGACCCAAG
CCGTACGTGG CGTTCAAACT GGACCCGCAG GCGATCCCCG ACCTCCCGGC GCCCCGTCCC
CGCTTCGAGA TCTTCGTGTA CTCGCCCCGC TTCGAGGGCG TCCACCTGCG TTACGGCAAG
GTGGCCCGCG GCGGTCTGCG CTGGTCGGAC CGGCGCGAGG ACTTCCGCAC CGAGATCCTG
GGTCTGGTCA AGGCGCAGAT GGTCAAGAAC GCCGTCATCG TGCCGGTCGG CTCCAAGGGC
GGTTTCGTCC TGAAGCACCC GCCCGCCGAA CGCGAGGCGC TCCAGACCGA GGGCGTCACC
TGCTACAAGG CGTTCATCTC GGCGCTCTTG GACGTCACCG ACAACATCGA CAACACCTCC
GGCAAGGTCG TGCCGCCGCC GGACGTGGTG CGCCGCGACG GCGACGACAC CTACCTGGTG
GTGGCCGCCG ACAAGGGAAC CGCGACCTTC TCCGACATCG CCAACGAGAT CGCCGCCCGC
TACGGCTTCT GGCTGGGCGA CGCCTTCGCC TCGGGCGGTT CGGCCGGTTA CGACCACAAG
AAGATGGGCA TCACCGCCCG CGGCGCCTGG GAGTCCGTCA AACGCCATTT CCGCACCATC
GGCGTCGACA CCCAGACCAC CGACCACACC TGCGTCGGCA TCGGCGACAT GGGCGGCGAC
GTGTTCGGCA ACGGCCTGCT GTGCTCCAAG CACACCCGGC TGGTGGCCGC GTTCAACCAC
ATGCACATCT TCATCGACCC CGACCCGGAC ACCGCCCCGG CGTACGCCGA GCGGGAACGG
CTGTTCAAGC TGCCCCGGTC CACCTGGGAC GACTTCGACA AGTCGATCAT CAGTGAGGGC
GGCGGCGTGT GGTCGCGCTC GGCCAAGTCG ATCCCGCTGA CCCCGCAGGT GCGCACCCTG
CTCGACCTGG ACGACACGGT CACGGAGCTG GCGCCCAGCG AACTGATCAA GGCGATCCTT
CGGGCCAAGG TCGACCTGCT GTGGAACGGC GGCATCGGCA CCTATGTCAA GGCCGCCACC
GAGACCCACG CCGAGGTGGG CGACAAGGGC AACGACGCGC TGCGCGTCGA CGGCGCCGAA
CTGCGCTGCA CCGTCGTGGG CGAGGGCGGC AACCTGGGCC TGACCCAGCG CGGCCGCATC
GAGGCCGCCA AGAACGGCGT CCGGCTGTCG ACCGACTTCA TCGACAACTC CGCCGGTGTC
GACACCTCCG ACCACGAGGT CAACATCAAG GTGCTGCTGT CGCGGGCCAT CAACGCCGGT
CAGCTGCCCG GTGCCGACCG CGACCAGCTG CTGATGGACA TGACCGACGA GGTCGCGCAG
CTGGCGCTGG CCGACAACTA CGCGCAGAAC GCGGCCCTGG CCAGTGCCGA CGCGCAGGCG
GGCAAGCTGC TGAGCGTCCA CATCCGGTTG ATGAAGCACC TGTCCAAGAC CGCCGGCCTG
GACCGCAAAC TGGAGGCGCT GCCCAACGAC AAGGAGATCG CCGCCCGCGT GTCCGCCGGT
GAGGGCCTCA CCGAGCCGGA ACTGGCGGTG CTGCTGTCCT ATGTGAAGCT GGGCTTCTCG
GACGAGATCA TCGCCTCCGA CCTGCCCGAC GAGGAGTGGA CCCGGCCGGT CCTCATCGAC
TACTTCCCGA AACCGCTGCG GGAACGCTTC GAGCGGCTCA TGCCCGAGCA CCCGCTGCGG
CGCGAGATCG TCACGACGGT GCTCATCAAC GAGGCCGTCA ACCGGGGCGG CACCTCGTTC
GTGTTCCGGG TCGCCGAGGA GACCAGCGCC CACGTCGCCG ACGTGCTGCG CGCCTACGTG
ATCGTCCGGG ATGTCTTCGG GCTCAAGGAC ATCTGGGCCG ACATCGAGGC GCTGGACAAC
AAGGTGCCCG CCGAGGCGCA GACCGCCGCG ATGCTGGTGA TCCGTCGGCT GCTGGACCGG
GGCGCGCGCT GGCTGGTGCA GAACCGGGCG GTGCCGCTGG ACGTGTCGGG CGAGACCGCG
CGGATGAGGC CGGGTGTCTC GCGGCTGTTG CCGCGCATCG GTGAGCTGCT GCGCGGCACC
GAGCGGGAGG GCATGCGCGC CTACACCGCC AAGCTGGTGT CCAAGGGCGT GCCGCAGGAC
CTGGCCGACC GGGTCGTGGG CCTGATGTAC GGCTTCGGGC TGGTGGACGT CGTGGAGGTC
GCCGACTCGG TCGAGGCCGA TGTGGACTCG GTCGCCGAGG CGTACTTCAC GCTCACCGCG
AGGTTCGGCG TCGACGACAT CCTCACCCGG ATCTCGGAGC TGCCGCGCGG CAACCGGTCG
CAGACCCTGG CGCGCACCGC GTTGCGCTAC GACCTGTACG CGGCCATGGC CGACCTGACC
CGGCAGGCCC TGTCCACCAC TTCGGAGGAC CTGGGGTCGG CCGAACGGGT GGAGCAGTGG
CAGACCGACA ACAGTGCCAC AGTGGAGCGG GTCACCGACG CGCGGGACGA ATTCGTCACC
GAAGGCGCAG ATCTCGCCGC ACTGTCCGTC CTGTTGCGAC AGGTGCGGAC ACTCGCTCAG
TCGTCGAGCA CTCGCAAACA GTGA
 
Protein sequence
MLAMAADDDD RNIDEELPNR DTLITEAVTL AGNDADLAEL IAMYWRFVPD EDLAGRTATD 
LYETTVAHRE LAWQRLPGEV KLSVTTPPMP EENGEGPIAV CHTEIDIVTD DMPFLVDSIT
AALTRRDLDI HVVVHPLVFA RREVMGALSK APCAKGEDDI VRESWMHFEV DRLRDSQAAE
EVHNAILKVL TDVRECVEDW PKMRDAAFAL AEEIDAEGHR LPVPERDLND AVGLLRWLAD
NNFTFLGYRE YRLADTPEGQ ALAAAPGTGL GLLRADQTAP KLLSSMTPEA YERVMEKRLL
IVTKTNSRST VHRNSYMDYI GFKIFDDEGN VVGERRFLGL FTSTAYLSSV KDLPLVSRKA
AEVMERSGLA ANSHSGKDLM AILETYPRDE LFQIRTDDLY RTVTDVLRLA GRRRLRFFAR
RDTYGRFFSC LIYLPRDRFN TDNRHKIQKI LMKRLNGVGI DFSTHVSESV LARIHMTVRV
DPANQPGDID EAAIQEELVE ATRSWDADFS MLLDRQLGDE QSKEVYSRYV DAFTNTYKDS
HSPKEAAKDI AKFELVDEPG ELALHLYRRR KSDTDVRFKV FRFGEPMMLS AVLPVLHSLG
VQVSDERPYE IAREDGTIFL HDFGLVMPDD LPVQVPQVRA IVENAFSASW RDEAETDGFN
ELVLRAGMTW RQVVILRAYA KYLRQAGTVY TAGFMAATLA ANPKLSTMLV SLFETYFDPS
LQLTTQGRDE AAEKLTGEFL TALEDVPSLG ADRILRSYLA LIQATLRTSY YQKGSSGRPK
PYVAFKLDPQ AIPDLPAPRP RFEIFVYSPR FEGVHLRYGK VARGGLRWSD RREDFRTEIL
GLVKAQMVKN AVIVPVGSKG GFVLKHPPAE REALQTEGVT CYKAFISALL DVTDNIDNTS
GKVVPPPDVV RRDGDDTYLV VAADKGTATF SDIANEIAAR YGFWLGDAFA SGGSAGYDHK
KMGITARGAW ESVKRHFRTI GVDTQTTDHT CVGIGDMGGD VFGNGLLCSK HTRLVAAFNH
MHIFIDPDPD TAPAYAERER LFKLPRSTWD DFDKSIISEG GGVWSRSAKS IPLTPQVRTL
LDLDDTVTEL APSELIKAIL RAKVDLLWNG GIGTYVKAAT ETHAEVGDKG NDALRVDGAE
LRCTVVGEGG NLGLTQRGRI EAAKNGVRLS TDFIDNSAGV DTSDHEVNIK VLLSRAINAG
QLPGADRDQL LMDMTDEVAQ LALADNYAQN AALASADAQA GKLLSVHIRL MKHLSKTAGL
DRKLEALPND KEIAARVSAG EGLTEPELAV LLSYVKLGFS DEIIASDLPD EEWTRPVLID
YFPKPLRERF ERLMPEHPLR REIVTTVLIN EAVNRGGTSF VFRVAEETSA HVADVLRAYV
IVRDVFGLKD IWADIEALDN KVPAEAQTAA MLVIRRLLDR GARWLVQNRA VPLDVSGETA
RMRPGVSRLL PRIGELLRGT EREGMRAYTA KLVSKGVPQD LADRVVGLMY GFGLVDVVEV
ADSVEADVDS VAEAYFTLTA RFGVDDILTR ISELPRGNRS QTLARTALRY DLYAAMADLT
RQALSTTSED LGSAERVEQW QTDNSATVER VTDARDEFVT EGADLAALSV LLRQVRTLAQ
SSSTRKQ