Gene Snas_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1909 
Symbol 
ID8883101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2024546 
End bp2025961 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAmidase 
Protein accessionYP_003510698 
Protein GI291299420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.769881 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCGA ACACCAGGAC CCTGCTGACG GCGAGCGAAC TCGTCGCGGC CTACGCGATG 
CGGGAGATCT CGCCGGTCGA GGCCACCCAG GCGGCACTGG ACGCGATCGA GGAGCGCGAC
GGCGAGTACA ACGCCTACTG TCTGGTCGAC CCGGACGCGG CGCTCGCCAC CGCCAGGAGC
TCGGAGGAGC GCTGGCTGGA GGGCAACCCC ATCGGCTGGC TGGACGGCGT ACCCGCGTCC
ATCAAGGACA TGTTCCTCAG CGAGGGTTGG CCGACCCTGC GGGGTTCACG CTGCATCGAC
CGTGACCAGG ACTGGAACGT CGACAGCCCG GTGACCGCGC GGCTGCGCGA GCACGGACTG
GTGCTGCTGG GCAAGACCAC CACGCCGGAG CTGGGCTGGA AGGCCGTCAC CGACAGCCCG
CTGGAGGGCA TCACCCGCAA CCCGTGGAAC CCCGAGCTCA CCGCCGGTGG TTCCAGCGGC
GGCAGCGGGG TCGCGGTCGC GGCCGGAATG GGCGAGTTGT CGGTGGGCAC CGACGGCGGC
GGTTCGGTGC GGATTCCCGC GTCGTTCTGC GGCATCGTCG GATTCAAGCC GACCGGCAGC
CAGATTCCGC TGTACCCGGC CAGCCCGTTC GGGCCGCTGG CGCACGCCGG TCCGATGGCC
CGCTCGGTCG ACGACGTCGC GCTGCTGTTG GACGTGCTCG CGCTTCCCGA CTACCGCGAC
CCGACCTCCC TGTACCCGCC GATGGCCGCC TACCGCGAGG CCGTCCGCCG GGACGTGCGC
GGCCTCAACG CCGCGTACTC GCCGAACCTC GGCTACCTGT CGGTGGATCC CGAGGTCGCC
CAGATCGTCG CCGCCGCGGT GGCGAAGCTG AACGACGCGG GACTCAACGT CGAGCAGGCC
GACCCCGGTT TCGCCGATCC GGTCGAGGCC CACGAGGTCA TGTGGGCCGC CGGTGCCGCC
AAGTGGCTGG ACAGCTTCCC CGAGGGCTCG GCCGACCTCG TCGACCGTGG GCTTCGCAAG
CTGTGGGACA AGGGGCTGAC GTACTCGGCC AGCGAATACC TCGACGCGCT GGCGGTGCGT
TCGGCGATCG GCATCCGCAT GGGTGAGTTC CACACCCAGC ACGACGTGCT GATCACCCCG
ACCGTGGCGA TCCCGCCGTT CAAGGCGGGT CACGACATCC CGCCGGGCAG CGACCTGTCC
AGCTGGCAGC GCTGGGCCGG GTTCAGCTAC CCGTTCAACA TGACCCAGCA ACCGGCGATC
AGCGTCCCGG CCGGGTTCAC CTCGCAGGGA CTGCCCGTCG GGCTGCAGAT CGTCGGGCCG
CGTCACTCCG ACGACCTGGT GCTGGCCGTG GCGAAACTGG CCGAGGAGGT CTGCCCGTGG
CCGACCGACA AACCGGCGGC GCCGCAGCGG CACTGA
 
Protein sequence
MPANTRTLLT ASELVAAYAM REISPVEATQ AALDAIEERD GEYNAYCLVD PDAALATARS 
SEERWLEGNP IGWLDGVPAS IKDMFLSEGW PTLRGSRCID RDQDWNVDSP VTARLREHGL
VLLGKTTTPE LGWKAVTDSP LEGITRNPWN PELTAGGSSG GSGVAVAAGM GELSVGTDGG
GSVRIPASFC GIVGFKPTGS QIPLYPASPF GPLAHAGPMA RSVDDVALLL DVLALPDYRD
PTSLYPPMAA YREAVRRDVR GLNAAYSPNL GYLSVDPEVA QIVAAAVAKL NDAGLNVEQA
DPGFADPVEA HEVMWAAGAA KWLDSFPEGS ADLVDRGLRK LWDKGLTYSA SEYLDALAVR
SAIGIRMGEF HTQHDVLITP TVAIPPFKAG HDIPPGSDLS SWQRWAGFSY PFNMTQQPAI
SVPAGFTSQG LPVGLQIVGP RHSDDLVLAV AKLAEEVCPW PTDKPAAPQR H