| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_1893 |
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| Symbol | |
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| ID | 8883085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 1995799 |
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| End bp | 2003331 |
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| Gene Length | 7533 bp |
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| Protein Length | 2510 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | YD repeat protein |
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| Protein accession | YP_003510682 |
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| Protein GI | 291299404 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.111399 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACCG CACAGCCACG GCCAGACGAC AGTGAGGCGT CGACAACCCC CACCGGGCCC
AGCTTGCCGG AGATTTCGCT GCCCACAGGG GGTGGCGCGG TCCGCGGCAT CGGCGAGAAA
TTCGCCGCCA ACCCCGCGAC CGGGACTGGG TCCACCTCTG TCCCCATAGC AACCAGTCCC
GGCCGCGCGG GGTTCGGTCC TTCGTTGAGT CTTGGTTACG ACTCGGGAAA CGGGAATGGT
CCTTTTGGGA TCGGTTGGCG GCTCTCGCTC GCGAACGTCA CCCGGAAGAC TGACAAAGGA
CTTCCGCGTT ACGACGACAG CTCGCCCGAC ACGTACATCC TGTCCGACAC CGAGGACCTT
GTGCCCATAC CCGGTATCCA GCACCGATTG CACGAGGGCA AAGGTTTCAC GGTCCGGCGG
TACCAGCCAC GTGTCGAGTC GGGACACTCC CGGATCGAGC AGTGGACGCA CGACGCCAGC
GGCGAGTCGC ACTGGCGGGT CATCACCGGC GACAACCTGA CCAACCGCTA CGGGACCACC
GCCGAAAGCC GTATCGCCGA CCCGCGCGAT CCCCGGCGGA TCTTCACCTG GCTGCTGTGC
GAATCCGTCG ACAGCCGCGG CAACGCGATG CTCTACGAGT ACAAGACCGA GGACGCCGCC
GGGGTCGACG TCGCGGCGCC ACACGAGGCC ACCCGCACCG ACGCCGACCG CACCGCCCAG
CGGTATCTCA AACGGATCAG GTACGGCAAC ACCGTCTCGC GGCTGCTGGA GCCCGACCTG
TCCGGCACCG GCTGGCTGTT CGAGGTGGTC TTCGACTACG GCGAACACGA CACCGACTCC
CCCGCCGAGA ACCGCGACTG GGACGTGCGC GTCGATCCGT TCTCCAGCTA CCGTTCCGGC
TTCGAGGTGC GAAGCTACCG CCGCTGCCAG CGTGTGCTGA TGTTCCACCA CTTCCCGGAA
CTGCCGCCCG ACACGCTCGT CAACGCCACC GGCTTCGAGT ACCGTGACGA CCCGGTGGGC
AGCTTCATGT CCACAGTGCG CCGTACCGGC TACCGGCGCG ACGGCGCCGG ATACGTCACC
GCCGCGCTGC CGCCGCTCGA ATACGACTAC ACCCGGGTGG AGATCGACAC CCGGCCCCGG
CAGCTGGACG AATCCGCGAT GGAGAACCTT CCGGTCGGGG TGGAGGGGCC GGGTTACCAG
TGGGTGGACC TGGACGGCGA GGGCCTGTCG GGTGTGTTGA GCCAGCAGGC TACCGGCCTT
TTCTACAAAC CCAATCTCGG CGACGGCCAC TTCGGACCGA TCCGCCAGGT GTCCTCGCAA
CCGTCGCTGG CCGACATCGA CGGCCCCGGA CAGCGGCTGG TCGATCTGGC CGGGGACGGC
TCACTGGACC TGGTGGACCT CAACTTCGCG GCGTCGGGTT TCTTCGAGCG GGGCGACGAC
GGCGAATGGC GGAGCTTCCG TACGTTCGCC TCGCCGCCCA ACCTGGACGC CGCCAACCCG
AACCTGCGGA TGGTCGACCT GACCGGGGAC GGCTTGGCCG ACATCCTCAT CACCGAGGAC
GACGTGTTCA CCTGGCACCC GTCGCTCAGC GAGGACGGCT ACGGCGCGGC GATGCGCACC
TACCCGCCGC TGGACGAGGC CGACGGGCCC CGGTTGGTGT TCGCCCACGG CGAGGACGCG
GTGTACCTGG CCGACATGTC CGGTGACGGA CTGTCCGATA TGGTGCGTGT CCGTAACGGG
GAGGTCTGCT ACTGGCCGAA CCTCGGCTAC GGGGTCTTCG GTGCCCGCGT CACCATGGAC
GACTCGCCGT GGCTGGACGA GCCCGACCAG TTCGATCCGC GACGGATTCG GCTGGCCGAC
ATCGACGGTT CTGGGACCGT CGACCTGATC TACCTGCACC GCACTGAGGC GCGGGTGTAC
CGCAACCGTT GCGGCAACGC CTGGGAGGCA CCCCAGGGTC TGGGGGTGGC GTTTCCGCGC
GCTGACTGGC TCGCGCGGGT GTCGACCGTG GACCTGCTGG GCAACGGCAC CGCCTGCCTG
GTGTGGTCGT CGCCGCTGCT GGCCGAGACC GGGACCCGGG TGCGGTACCT GGACCTCATG
GGCAGCACCA AACCGCACCT GCTGACGTCC ATTGTCAACA ACATGGGTGC CGAGACGCGC
ATCGAGTACA CGCCCTCGAC CCGCTTCTAC CTGGACGACC AGCGCGACGG CCGGGACTGG
ATCACCAGGT TGCCGTTCCC GGTGCACGTG GTGTCCCGTG TGGAGATCGT CGACCGGATC
TCCGGGCACC GCTTCGCCAC CACCTACACG TACCACCACG GCTACTTCGA CGGCGTCGAG
CGCGAGTTCC GGGGCTTCGC GATGGTCGAA CAGCTCGACA CCGAGACCTT CCCCGCGCTC
GCCGCGTCGA ACGTGGACGC CGTGACGCAG CTGCCGCCGG TGCTGATGAA GACCTGGTTC
CACACCGGGG CGCACCTGGG CACCGAGCGG ATCTCGCGGC AGCTGGCGGG CGAGTACTAC
CGGCCCGAGG GCGACGCCGA ACTGCTGCTG CCCGACACGG TGCTGCCGGA CGGACTCAGC
CCCGAGGAGG AGCGACAGGC GCTGCGGGCC CTGCGGGGCA AGCTGTTGCG CAAGGAGGTG
TTCGCGCTCG ACGGGGGCGT GACCTCCGAG ATCCCCTACA CGGTGGTGGA ACAGAACTAC
GGGGTGCGGC GGCTGCGGGA AGCGGGTCCC GACGGCTTCG CGGTGTTCCA GGTCCACGGC
CGCGAGACCA TCACCGCCGA CTACGAACGC ACACTGTACA CACTGGCCGG ACAGCCGTTC
GCCGATCCCC GGCTGGCCCA CGAGGTGGTG CTGCGCGTCG ACGAGTTCGG CAACACGCTG
GCCAGCGCCG CCGTCAACTA TCCCCGTCGC TTCGGCGATC CGGAACTGTC CGGTGAGGAC
GCGCTGCAAC GCCTGACGCA GGTCTTGTAC ACCGAGTTCG ACTACACCAA CACCGTGGAC
GACGCCGACG ACTACCGGCT GCCGCAGCCC AGTGGCAACC GGGCCTTCGA GATCCGGGGG
CTGGCGCCCG TGTCGGGTGA CGGCAAGGGG TTCAACGTCT TCGACTTCAC CGAACTGGAA
GCCGGGCTGG CGGACACGAC CGCCGATATC CCGTACCGCG ACACACAGAC CGGTGTCGGG
CGGCGACTGG TGGAACAGGT GCGGGTCCGG TACCGCCGTG ACGATCTGGA CGGGCCGCTG
CCGTTCGGTG TCCTCGAGGC GCAGGGGCTC CCGTTCGAAA GCTACCGGCA GGCGTTCACC
CCCGACATGC TCGACGAACT GTACGGGGAC CGGGTGGACG AGGCCGTGCT CGCCGAAGCC
GGTTACGTCG GCTTCGACGG CGCGCTGTGG GCGCCGTCGG GGCGGGGTTT CCTGTCCCCG
GCCCCGGAGG ACTCGGCGGC CGAGGAACTG GCGCACGCCC GGTCGCACTT CTTCGGTGTC
CGCCGCGTCC GCGACGCCTT CGGCGCCACG TCGGTGGCCG AGTACGACGA GCACGATCTC
GCCGTCGTCG TCACCCGCGA CCCGCTCGGC AACGAGGTGC GCGCCGACAA CGACTACCGG
GTGCTGTTGC CGTGGCAGAT CACCGATCCC AACGGCAACC GCAACCGGAT CGCCTACGAC
GCGCTGGGCG AGGTGGCGGG CACCGCGGTC ATGGCCAAGG ACGGCCAGGA CCTCGGCGAC
AGCCTCGACG ACTTCACGAT CGACCTGTCC GAGGCCGACA TCGCGGCCTA TGTCGACGAT
CCCCGGGAGT CGGCGGCCCG GCTGTTGGGC ACCGCGTCCA ACCGGGTCCT CCACGACCGG
CTGGCCTATC TGCGGACCCG CGACGAGGAG CGTCCGTCGC CGGTCGCCAG TGCCACCATC
GCGCGTGAGA CCCACGTGTC GGACCTCGAT GTCGGCGCCG AGGCGCGGCT CCAGCACCGA
CTGTCGTATT CGGACGGTTT CGGCCGCGAG ATCCAGCGCA AGGCGATAGC CGAGCCGGGG
CCGGTTCCCG GCGGCGGGAC CGCCGATCCC CGCTGGATCG TCAGCGGCTG GACCGTGTTC
AACAACAAGG GAAAGCCGGT CCGCCAATAC GAACCGTTCT ATTCGGACAC GCACCGCTAC
CAGCCCGACA GTCCCTTCGG CGTCAGTCCG GTGATGTTCT ACGACCCGCT CACCCGGGTG
GTGGCGGTGC TCAACCCCGA CGACACCTGG GAGAAGACCG TCTTCGACCC GTGGCGGCAG
GACTTCTGGG ACGCCAGCGA CACGCTGCTG ACCGATCCCC GCAAGGACGG CGACATCGGC
GGCTTCGTGC AGTCCTATTT CGACTCGGTT CCGGACTGGA CCAGCTGGTA CGAACAGCGG
GTCGGCGGTG AGCTGGGTCA GGCCGAACGG GAGGCGGCCC GCGCGACCGA ACCGCACGCG
GGGACCTTCG CCACCAGCTG GTTCGACTCG CAGGGGCGTA CCTTCCTGAG CCTGGCCCGC
AACCGGTTCG TCCGCGACGG GGCCACCGTC GACGAGCGGC AACGGATACT GACCGAACTG
GACATCGAGG GCAACGAGCT GCGGGTGACC GACGCCCTGG GCCGGGTGAT GACGGCCTGC
GAGTACGACA TGCTCGGTCA GCGGGTTTCC CAGTCCGGTA TGGACTCCGG GCGCCGACTG
CTGCTGGACA GCATCGACGC GCTGCCGGTG CGCGCTTGGC ACGACAACGG TTTCGACTAC
CGCAACGAGT ACGACGTCCT GCGCCGCGCC ACCGGATACT TCGTGTCCGG CGGTGACCTG
GACGGCGAGA TCCAGCACGA ACGCATCGAG TACGGCGAGA CCGTCACGGA CGCGTCGAAA
CGCAACCTGC GGTTGAAAGT CCACCGTCGC TTCGACGCGG CCGGGGTCGC GGTCAACCGG
GACTTCGACT TCAAGGGCAA TCCGGTGCGG GCCACCCGGC AGCTGGCCAC CGAGTACCGG
CGTTCCCCGG ACTGGTCGAC CGACGTGCCG TTGGAGGCGG CGGTCCACGA CTCCCGCACC
GGCTACGACG CGCTCAACCG TCCGGTGCGG ACGGTCGCTC CGGACGGCAC CGTCAGTCAT
CCGCGCTTCA ACGAGTCCGG GCTGCTGGAC CACCTGGAGG TCAGAGTGGG CGGCGTCGAG
GACGCCACCG AGTTCGTCTC CGACGTCGGC TACGACGCGC AGGGCAGGCG GACCCGCGTC
GACTACGGCA ACGGCACCGT CACGACCTAC GAGTACCATC CGCTGACGTT CCGGCTGACC
CGGCTGCACA CCGTGCGCGG CAAGGAGTCC GTGCAGGATC TGTCCTATGT CTATGATCCG
TCGGGGAACC TGACCAGGAT CACCGACCGC ACCAAACAGG CGGTGTTCTT CCGCAACCAG
CGCGTCGAGG CCGGTAACTC CTACACCTAC GACTCCACCG GCAGGCTCAT CGAAGCCCAC
GGCCGTGAAC ACCTGGGGCA GCTGCCGACC GGCCAGGACG ACGAGCGGCG GCTCGGCCTG
CCGCATCCCA ACGACGGCAA GGCGATGGCG CGATACGTGG AGCGCTACGA CTACGACGCC
GTCGGGAACC TGCTGTCGGT CAGGCACCGC GGCTCGGATC CGCGGCACGG TGGCTGGACG
CGCCGGTACC ACTACGCCGA GGCCAGCCTC ATCGATCCGG CCGACATCGG CAACCGGCTC
ACCGACGTGG GTGACGCGTC CTTCGCCTAC GACGCGCACG GCAACGTCAC CGCGATGCCG
GAACTGCCGG TGATGGCCTG GAACTTCAAG GACCAGCTCA GCCACAGCTC ACGACAGTCC
GTCGACGACG GCGACGCCGA GACCACCTAC TACGTGTACG ACAACACCGG CGAGCGGATG
CGCAAGGTCA CCGAGCACGG TGGACAGCTG CGCTCCGAAC GCGTCTATCT GGGCGGCTTC
GAGATCACGC GGACCTACAC CGGCGGCGAC CTGGACGTGG AGCGGCAGAG CTTCCACGTC
ATGGACGACA AGAAGCGGGT GGCCATCGTG GACCGCCGCG TCGCCGGCGA GGACCCCGGC
GCGGAGTCCC TGACCAGGTA CCAGCTCGCC GACCACCTGG GTTCGTCCGG ATTGGAGCTC
GACGACCAGG CGCAGGTGAT CAGTTTCGAG GAGTACTACC CGTTCGGCGG CACCTCGTTC
CAGTCGACCC GCGAACATAC CGAGACCCCC AAGCGCTACC GCTTCACCGG CAAGGAACGC
GACACCGAGT CCGGCCTGTA CTACCAGGGC GCCCGGTACT ACGCGCCCTG GTTGGGGCGC
TGGACCTCGG CCGACCCGGC CGGCCCCCGC GACGGCGCTT GCCCGTACGC CTATGTGGGC
AACAATCCGC TGCGGCGCAC CGACCCGAGC GGTTTGGAGG GCGACGAACC CGAGCAACTG
AACTTCGCGC AGTCACCGGC GTTCTGGCAA CAGGTGACCG CCACCGCCAA GGGCCGGGGC
ATCTCCGACG CCACCCGCGC CAACCTGCAA AAGGTGGCCC AGATGTGGGG CCTGGACGGG
CCGATCGCCG CCGGCCACCT CGAAGACCAT CCATTCTGGT CACAGCCGGC GGGGACGGTG
TCGCCCGTGT ACGCGCAGAA CGCGCTGTCC AACGCCCTGC AGTCGGTCCA GGAACGCGCC
GATTCGCAGG CCGCCAAGGC CGCCGGACTG TTCGCCCGGG TCGGCGGTGC CGACCCCGGC
GCGGTGCCCG GCACCAAGTA CGGTCAGCCG CCCACCAACC CGAACTTCCT GACGCCGGGA
TTCCAGTCCT GGACGCCGCC GGGCCCGCAG ACGCCGCTGG TCACGTTGCC CGCCACCACG
TCCGCCCCGG TGTCGACGCC GCTGGGTCCC GCCCAGCAGT CCTTCGCCTT CCCCGAACCG
CCGGCGCAGT TCGAGCTGTT CGACTCCAAG GGACAGCCCA CCCGGCCGCA GTTGCCCGTC
AGCACCGCCG CGCCGCAGAG CACCCCCAGG CCGCCCTCGC CGCCGAGCAC GCCCTCGGCA
CAGGTGGAGA TGGACTACAC GCCCCGACCG CCGACGCCCT CGCCCCGGTC CTCGGGTGCC
TCGCTGCCCG CGCCGGGTGG TTTCGGCGCC GCCGCCGGCA ACGGCGCGCT GGCGATCACC
CGCGGCGTGG TCCCGGGTGT CGTCGAAGCC GAGCTGGCCT TCTCCGCCGG GGCCTACTAC
ACCGCGTCGG CCGCCGCCGC GACCACCGGC ACCACGTCCA CGGCGCTGGC CGCCACCAGT
GCCGGACTGA CCACCGCCGC CGCCTACACC CCCGTCGTGG GCGCCAGCCT GGCCACCGGC
GCGGTGGTGG GCAACCTCGC CGAGTCCGGG GCCACCTCCC TGGGCGCCTC GCAACCCGTC
GCCGAGGCGG TCGGCGCGGG CAGCGCCACC CTGGCCGGAG CCGGGGTGGG GGCACTGGTC
GGCTCGGTGG TCCCCGGAGT GGGGACCGCC GCCGGAGCCG CGGTGGGCGC CGCGGCCGGA
TACGCCGGCT ACCTGATCAG CAAGTACTGG TGA
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| Protein sequence | METAQPRPDD SEASTTPTGP SLPEISLPTG GGAVRGIGEK FAANPATGTG STSVPIATSP
GRAGFGPSLS LGYDSGNGNG PFGIGWRLSL ANVTRKTDKG LPRYDDSSPD TYILSDTEDL
VPIPGIQHRL HEGKGFTVRR YQPRVESGHS RIEQWTHDAS GESHWRVITG DNLTNRYGTT
AESRIADPRD PRRIFTWLLC ESVDSRGNAM LYEYKTEDAA GVDVAAPHEA TRTDADRTAQ
RYLKRIRYGN TVSRLLEPDL SGTGWLFEVV FDYGEHDTDS PAENRDWDVR VDPFSSYRSG
FEVRSYRRCQ RVLMFHHFPE LPPDTLVNAT GFEYRDDPVG SFMSTVRRTG YRRDGAGYVT
AALPPLEYDY TRVEIDTRPR QLDESAMENL PVGVEGPGYQ WVDLDGEGLS GVLSQQATGL
FYKPNLGDGH FGPIRQVSSQ PSLADIDGPG QRLVDLAGDG SLDLVDLNFA ASGFFERGDD
GEWRSFRTFA SPPNLDAANP NLRMVDLTGD GLADILITED DVFTWHPSLS EDGYGAAMRT
YPPLDEADGP RLVFAHGEDA VYLADMSGDG LSDMVRVRNG EVCYWPNLGY GVFGARVTMD
DSPWLDEPDQ FDPRRIRLAD IDGSGTVDLI YLHRTEARVY RNRCGNAWEA PQGLGVAFPR
ADWLARVSTV DLLGNGTACL VWSSPLLAET GTRVRYLDLM GSTKPHLLTS IVNNMGAETR
IEYTPSTRFY LDDQRDGRDW ITRLPFPVHV VSRVEIVDRI SGHRFATTYT YHHGYFDGVE
REFRGFAMVE QLDTETFPAL AASNVDAVTQ LPPVLMKTWF HTGAHLGTER ISRQLAGEYY
RPEGDAELLL PDTVLPDGLS PEEERQALRA LRGKLLRKEV FALDGGVTSE IPYTVVEQNY
GVRRLREAGP DGFAVFQVHG RETITADYER TLYTLAGQPF ADPRLAHEVV LRVDEFGNTL
ASAAVNYPRR FGDPELSGED ALQRLTQVLY TEFDYTNTVD DADDYRLPQP SGNRAFEIRG
LAPVSGDGKG FNVFDFTELE AGLADTTADI PYRDTQTGVG RRLVEQVRVR YRRDDLDGPL
PFGVLEAQGL PFESYRQAFT PDMLDELYGD RVDEAVLAEA GYVGFDGALW APSGRGFLSP
APEDSAAEEL AHARSHFFGV RRVRDAFGAT SVAEYDEHDL AVVVTRDPLG NEVRADNDYR
VLLPWQITDP NGNRNRIAYD ALGEVAGTAV MAKDGQDLGD SLDDFTIDLS EADIAAYVDD
PRESAARLLG TASNRVLHDR LAYLRTRDEE RPSPVASATI ARETHVSDLD VGAEARLQHR
LSYSDGFGRE IQRKAIAEPG PVPGGGTADP RWIVSGWTVF NNKGKPVRQY EPFYSDTHRY
QPDSPFGVSP VMFYDPLTRV VAVLNPDDTW EKTVFDPWRQ DFWDASDTLL TDPRKDGDIG
GFVQSYFDSV PDWTSWYEQR VGGELGQAER EAARATEPHA GTFATSWFDS QGRTFLSLAR
NRFVRDGATV DERQRILTEL DIEGNELRVT DALGRVMTAC EYDMLGQRVS QSGMDSGRRL
LLDSIDALPV RAWHDNGFDY RNEYDVLRRA TGYFVSGGDL DGEIQHERIE YGETVTDASK
RNLRLKVHRR FDAAGVAVNR DFDFKGNPVR ATRQLATEYR RSPDWSTDVP LEAAVHDSRT
GYDALNRPVR TVAPDGTVSH PRFNESGLLD HLEVRVGGVE DATEFVSDVG YDAQGRRTRV
DYGNGTVTTY EYHPLTFRLT RLHTVRGKES VQDLSYVYDP SGNLTRITDR TKQAVFFRNQ
RVEAGNSYTY DSTGRLIEAH GREHLGQLPT GQDDERRLGL PHPNDGKAMA RYVERYDYDA
VGNLLSVRHR GSDPRHGGWT RRYHYAEASL IDPADIGNRL TDVGDASFAY DAHGNVTAMP
ELPVMAWNFK DQLSHSSRQS VDDGDAETTY YVYDNTGERM RKVTEHGGQL RSERVYLGGF
EITRTYTGGD LDVERQSFHV MDDKKRVAIV DRRVAGEDPG AESLTRYQLA DHLGSSGLEL
DDQAQVISFE EYYPFGGTSF QSTREHTETP KRYRFTGKER DTESGLYYQG ARYYAPWLGR
WTSADPAGPR DGACPYAYVG NNPLRRTDPS GLEGDEPEQL NFAQSPAFWQ QVTATAKGRG
ISDATRANLQ KVAQMWGLDG PIAAGHLEDH PFWSQPAGTV SPVYAQNALS NALQSVQERA
DSQAAKAAGL FARVGGADPG AVPGTKYGQP PTNPNFLTPG FQSWTPPGPQ TPLVTLPATT
SAPVSTPLGP AQQSFAFPEP PAQFELFDSK GQPTRPQLPV STAAPQSTPR PPSPPSTPSA
QVEMDYTPRP PTPSPRSSGA SLPAPGGFGA AAGNGALAIT RGVVPGVVEA ELAFSAGAYY
TASAAAATTG TTSTALAATS AGLTTAAAYT PVVGASLATG AVVGNLAESG ATSLGASQPV
AEAVGAGSAT LAGAGVGALV GSVVPGVGTA AGAAVGAAAG YAGYLISKYW
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