Gene Snas_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1891 
Symbol 
ID8883083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1985147 
End bp1985806 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510680 
Protein GI291299402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.110654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCA CTGCCCGCCT GCCCCGAAGA ATCCTCATTG GATTTATGGT GTCCGTGTTC 
GTCTTCGCCG CTTTGGCCAT CGCCTGGCCC TCGCCCGCCG CGGCGATTCC CGCGAACATC
CCGTCCAAAT CCGTCATCCA GTCCGAGCTC AACGGCCTCT CCGTCGCCAG CGAGGGCTCC
ATGACCGGAT ACTCGCGCGA CAAGTTCCCA CATTGGGTGA CCATCTCGGG CAGTTGCAAT
GCCCGCGAGA CGATCCTCAA ACGCGACGCC GACTACGTGA CCGTCGGTTC GGACTGCTAC
CCGACCTCGG GCAAGTGGTA CAGCCAGTGG GACGGCGTCG TCAAGACCGT CGCCTCGGAG
GTCTCCATCG ACCACCAGGT CCCGTTGGCC GAGGCGTGGC GTTCGGGAGC CAGCTCCTGG
ACCACCGCCA AGCGGCAGGA CTTCGCCAAC GACGTCGTCG GCACCGAGCT CATCGCCGTC
ACCGCGACCG TGAACAGTTC CAAAGGGGAC AAGGACCCCT CCGCGTGGAA ACCGCCGCGC
ACCGGCGCCT ACTGCCTGTA CGCCAAGATG TGGATCCACG CGAAGCACAA ATGGGGACTG
AAGCTCCAGT CCGCGGAGAA GACCGCGCTG CAGTCGATGC TCAACACCTG CTCCTACTGA
 
Protein sequence
MPGTARLPRR ILIGFMVSVF VFAALAIAWP SPAAAIPANI PSKSVIQSEL NGLSVASEGS 
MTGYSRDKFP HWVTISGSCN ARETILKRDA DYVTVGSDCY PTSGKWYSQW DGVVKTVASE
VSIDHQVPLA EAWRSGASSW TTAKRQDFAN DVVGTELIAV TATVNSSKGD KDPSAWKPPR
TGAYCLYAKM WIHAKHKWGL KLQSAEKTAL QSMLNTCSY