Gene Snas_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1888 
Symbol 
ID8883080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1981473 
End bp1982765 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content70% 
IMG OID 
ProductErythromycin esterase 
Protein accessionYP_003510677 
Protein GI291299399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0493647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA TCCCGCTGAA CACGCTCGAC CCTGCGGCGC CGCTGGACGA CCTTGACTGG 
CTCGACGGCG TGGTCGGCGA CGCCCGCGTC GTGGCCATCG GGGAGAGCTC GCACTACAAC
CGCGAGTTCT TCCAGCTGCG CACCCGGCTG CTGCGCCACC TGGTGGAGCG GCACGGGTTC
ACCGCCCTCG CGATCGAGTC GGGCTTCACC GAGGGCTGGC GCACCGACGC GTGGGTGCGC
GGCGCGGGCG AGGACGCCGA GATCGGCGAG GTGCTGGCGA CCGGCGTGAC CTCGATGTTC
GGGCTGTGGA CCGAGGCGCG CGAACAGCTG GAATGGCTGC GGGAGCACAA TCGTCGCGCC
GATCGCGGCG TGGGGTTCTA CGGCATCGAC CTGCCCGGTT CCCAGGCCTC GATGCTGCCC
GGCCTGGACG CCGTGACCGA GTACCTCGTC ACCGCCGACC CGAAGTACAC CGTCGACCCG
GCCATCCGCG ACACGGTCAC CGAGTACGCG GCGTCGTCCG CCTTCGGTGT GCCACAGGCG
ATCCAGACGT ACCTCAGCCT TGGCGCCGAA CGCCGGGACG CGATCACCGC GGGCCTGGCC
GACCTCGTCG GGCGGATGCG GGCGCTGCGC GCCGAGTACG TCGACCGCAC CGACGCTGAA
TCCTTCGAAC GCGCCCTGCG CACCCTGCTC AACACCGTCG CCCTGGACGC GATGGTGCGC
GAGGTGGCCC GGGGCAATCC CGAGGGCATC CACTCCAGCC TGCGGGACAG CGCGATCGCC
GACACCGTCA AGCTGATCCT CGACCGGGAG GAGCGTGTCG TCATCGGCGC CCACAACGCC
CACGTGCAGC GCTCGGCGTT CACCTTTCCC AGCATGGGCA CCTCGGCGAC GATGGGCATG
CACCTGGCCG AACACCTCGA CGAGGACTAC GTGACCATCG GCACCACCTT CGCCGACGGC
GAGATCCTGG CCACCGGCGA GGGCTTCTAC GCCGGGGAAC TGTTCTCGGA GGCGGAAAAG
CCGCAGCCCG GAAGTCTCGA CGCGCTCATG GCGGCCAGCG GTGACGGCGC CTTCGCGGTG
GACCTGCGAC AACTGTCGAA ACAGGACGCC GACCTGCTCG CCGGAACCAT GGCGCACCGG
ATCAGCTCGT TTTACATCGA CGTGAACCCG TCGACGGCCT TCGACGCCAT CGTCCACATT
CCACAGGTCA CTGCGGCGAC GCCCGACCCC GACGCCCTGG CCCACTCACC GGCCCCGGTG
CGCGAGACCT TCGCCAAGTA CCGCCCGGAG TGA
 
Protein sequence
METIPLNTLD PAAPLDDLDW LDGVVGDARV VAIGESSHYN REFFQLRTRL LRHLVERHGF 
TALAIESGFT EGWRTDAWVR GAGEDAEIGE VLATGVTSMF GLWTEAREQL EWLREHNRRA
DRGVGFYGID LPGSQASMLP GLDAVTEYLV TADPKYTVDP AIRDTVTEYA ASSAFGVPQA
IQTYLSLGAE RRDAITAGLA DLVGRMRALR AEYVDRTDAE SFERALRTLL NTVALDAMVR
EVARGNPEGI HSSLRDSAIA DTVKLILDRE ERVVIGAHNA HVQRSAFTFP SMGTSATMGM
HLAEHLDEDY VTIGTTFADG EILATGEGFY AGELFSEAEK PQPGSLDALM AASGDGAFAV
DLRQLSKQDA DLLAGTMAHR ISSFYIDVNP STAFDAIVHI PQVTAATPDP DALAHSPAPV
RETFAKYRPE