Gene Snas_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1884 
Symbol 
ID8883076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1976270 
End bp1977421 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content72% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003510673 
Protein GI291299395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0784201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGG AGACCGCGAC ACGTTGGTGG GGCCGGGCGC GTCCGTTCGT GTTCGCCGCC 
GTCGTGTTCG TCGTCGGGCT GATACCGGTC AACGACGAGC GCACCCCCGA CTGGCTCGCA
CTGCCCACGG TGTGGCGCGC GGCGATACCG GCCGCGCTGG CACTGGCGGC GGCCTGGCTG
CTGCCGCGCC GCTGGCCGAT GGTGGCCCTG GCGGTGGTGG TCTCCCCGTT CGACACCCTG
ATCGCGGGGA CCTGCCTGAT CGTGGCGTCC TATGTGATCG CCACCGGCTA CCGCGGCGTC
GTCGAACTGG TGCTCAGTCT GGTCGCCGTG CTGTGCGCGC CGCTGATTCC CACCCTGGCC
TCGGCCCCCA GCGTCGACGA CCTGATGGGA TGGCTGGGCG GCACGGCGCT GTTCGTGTGG
CTGCCGCTGA CCGTGGGCCT GTGGGTCCGC ACCCGACGCG TCACGCTGGA ATCGTTGCGG
GACAAAGCTT CCCGACTGGA ACGCGAACAG GCGGCTGTGG CCGCGAGGGC CCGCGCGGAG
GAACGCGGCC GCATCGCCCA CGAGATGCAC GACGTGGTGG CGCACCGGGT CTCGCTGATG
GTGATGCACG CCGGGGCGCT GGAGGTCAAC GCCCCCGACG CGGCGGTCGC CGAGTCCGCC
GAACTCATCC GAGCCACCGG TTCCGAGGCG CTGGCCCAGC TGCGCGACGT CCTCGGGGTG
CTGCGGTACG GCGAGACGGC CCGCACCACG CCGCAGCCGA CACTGGCCGA CCTGGACACG
CTGCTGGCGG AGTCGCGGCG CGCCGGGGTG GACGCGACCG CGACCTCCAC CGGCGAGGCC
CAACCACTGT CGACACTGGT CGATCAGACC GCCTACCGGG TGATCCGCGA ATCCCTCACC
AACGTCCACA AGCACGCCGG TGCGGTGGCA TGCGTCGTCA CCCTCGACCA CCAGCCCGAG
CGGCTGCTGG TCACCGTCCG CAACGACCCG CCGCGCCGCC CACCGCGACT GCCCGGCAGC
GGTACCGGGC TGATCGGGCT GCGCGAACGG CTGACGCTGC TGGGCGGCGA ACTGTCCACT
CGCGCCGAAC CGGACGGCGG ATTCCGGTTG ACCGCCAGCA TTCCGCTGCG CACCGAGACG
GCCGCGGCAT GA
 
Protein sequence
MTWETATRWW GRARPFVFAA VVFVVGLIPV NDERTPDWLA LPTVWRAAIP AALALAAAWL 
LPRRWPMVAL AVVVSPFDTL IAGTCLIVAS YVIATGYRGV VELVLSLVAV LCAPLIPTLA
SAPSVDDLMG WLGGTALFVW LPLTVGLWVR TRRVTLESLR DKASRLEREQ AAVAARARAE
ERGRIAHEMH DVVAHRVSLM VMHAGALEVN APDAAVAESA ELIRATGSEA LAQLRDVLGV
LRYGETARTT PQPTLADLDT LLAESRRAGV DATATSTGEA QPLSTLVDQT AYRVIRESLT
NVHKHAGAVA CVVTLDHQPE RLLVTVRNDP PRRPPRLPGS GTGLIGLRER LTLLGGELST
RAEPDGGFRL TASIPLRTET AAA